Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0416 TTGCTGGAGTCGAATGCTCATCTTCTCGAAGACTACCCAGACCTGGAGCCACCGGAACCCTACCCAGAGGAAGACCAAGAAGCGCCACCAGCAGCGCAACCACCACCATCCCCAGATCTTCAATTCGATCCCGAAGTCCAAATCATTGGCCACAAGCGATCGAGGTCGGATAGTCCTGATGTGTCACTTTCAGAAGCTGTTCGGCCGTCAGAGGAGAAAAGGGGCAGGGCCGACGATTCAGTGCGGGAGAATGATGAGGATTGGCTTCGCTACTCGCCATCCCAGGGAAGTGATCATGCAGTGGAAGAACGAGTTAACtttgtgaaggagaagatgTTATCCAGGTATGCATCAGAAATTGATGGGGAGTGTATGCCGGTCACTGCACCCAATGGTGACAGGGTTTATGCAAAGTTAAATAGGTCGGAAGGGGAGGAACGGTTGAAGAAACTGGATGTGAGAGCAAATTCTCATGATCTTATTTCGGAACCCATTAATATTCTGTTTGAGAAATTGGAGCAAGAGGCTTTCACTAAGACTTTGAAAGCTAGTACCGAATGCGAAAGTGTTCCAGATGTTCCCGAAACACCAGTTGTCCATGAGAAACTTTGGGTAGATAAATATACTCCCAAATCATTTACCGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTATGGTTGAAGCAATGGGATTCTAGCGTATTTGGATCTGAGATTCGAAGTACATCAGATGAGGTTTTGTCTGCTTTGAAACGACATTCTACTGTTGCCCATCATCAGAAACCTTTGGATTCAAAGTTTTCACGGATGAAAAGAGGACCCAAATGGAGCAACAATACATATAGGCATTCTAAAAGTATGGACGAGACTGGTAATTCAAATAGCATTCAGGATATATTGAATAAGAAGTCAAAACATATCGGTCCACCAGAACAGAAGATCCTTCTGCTCTGTGGCCCACCAGGCCTTGGAAAAACTACACTTGCTCATGTAGCTGGTAGACATTGTGGATATCACGTGGTGGAGGTCAATGCCAGTGATGATCGTAGTACATCGACAATTGAAGCCAAAATCCTTGATGTTGTTCAGATGAACTCTGTCATGTCTGATTCAAGACCAAAGTGCCTGGTGGTGGATGAAATTGATGGAGCACTTACAGATGGCAAAGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGCTgaaaagaaatctgatgtgggaAAGGAAACTTTGGCAAAAGAGCATCCAGGAAGGAAGTCCTCAAAGAAGGGGCGTCATACTACATCACTGTCAAGGCCTGTAATTTGCATTTGCAATGACCTATATGCTCCTGCCTTGAGACCATTACGACAGGTAGCAAAGTTATGGGAAGATGACGGTGTGTCATCTTCCCATACAGGGTTCACATATTTGTTCAACCAACAGTTAGCCGTGTGgctcaaatatatatgtaacaaGGAGGGAATGAAAGCTAATGCCATTGCACTTACTGCTCTAGCTGAATATACAGAATGTGATATACGCTCATGCTTAAATACTCTCCAATTTCTCAGTAAGAAGAAAGAAACCCTCAATGCGTTCCcttttgtttgttgttggaAAAATCAAAGGATTGTCTTATATGTTAGAGGAAGGGAGTACATATCTAAAACATGTCTGATCTTGGCTTCTTTaattgattatcaagaaaaataTCTTGCTGCAGTTTTCTTTGGTTTTGAAGATTATGCCatgaagaataaaataaatggattttctaagTTTGATATTGGTTCTCAAGTAGTTGGCCGGAAAGATGTGTCAAGGAATGTTCTGGATGTCTGGAAAGAGGTTTTCCAAAGGAAAAAAACAAAGATGGAAAGGAAATCTTGCAGTAGCAAGCCCTTTGAGTTTAACTCCTTGTACTCCCTTCTATCAAACCGCGGTGATGGTGACTTGATTCTTGATGGAATTCATGAAAACATTTTGCAGCTCAGTTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTAGGAGTTTATGATCTACTGCATCAATATATTATGCGTACTCAACAAATGCCCCTTCAGGtttattTGCCCTCCATAGCGATTACTGTAAATCGCCTAGTAGCCCAAGTTCAAAAGCCAAATATTGAGTGGCCAAGGTCCTATCAAAGGTTTCGAACAATGATGACAGAAAAGATGGACATTTTAAATACTTGGCATTACAAAATTCCACCACAAATTGCAAGACATTTATCAGCTGTTTCTTTTGTTGAAGATCTAATTTCTCCATTATTACATATTCTGACCCCACCTTCTTTAAAACCGGTGGCACTACAATTACTATctgataaagagaaaaaagatcTTGTGCAATTAGTTAGCACAATGGTCTCTTATTCTATAACATATAAGAATACAAAATCAGATGTGCTGCCTAATAGCCTTAGACATGTAGTAGCAGATGACTTATCTCTTGATCCCCCTATTGGTGGCTTCATAAATTTTAAGGATTATACCTCAAATCATTATGTGCTTTCTTTAGCTATGAAGCAGATTATTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTAAATATAGACAGGCATTCAGGAAATGAAAGTAGCAGCGGAAGGCATGAACTTATTGAGGCTGGAACTAGCAATGCCCAATCATCCAAAATCAATCATGCAGCTGAAATTTCTGTGAAAAACattcaaaatgaaaataatatctGGGAAGCAAGGAAATATAATGCTAATGCCGCCATAGTTTCACCAAACTTGCACCCTGATAAAGGTGTGACAGATAATGTGAAACTGTTAAACACAGGAAGTATGAAAAAGCCATCCGCTGGTTCCTTTTTTGACAGGTTTAGAAAGTTGAGTAGTAAAGGTCTTCAAAGTGATGATAGAacagaaaagaaagaagcatcCTTAGAGATAGATTCACGCCCACTACTCTTTAAATTTAATGAGTGTAAGATCATCTTGTGTGGAGTTGAAGTACACTCATTTAAGGGCATTGGATATGTCAGCAAAGAAAATTTTCGAAGTCATAGCatgcatttttctttattaaagcACAATGGAAAAAAGCCATATCAGTCAAAGGCAAAGATGTTTAAGGCATCTGCAATAGGGAAGCTTGTATTGAAACCTTGCTATCTCACTGTCTAA 3192 0.385 LLESNAHLLEDYPDLEPPEPYPEEDQEAPPAAQPPPSPDLQFDPEVQIIGHKRSRSDSPDVSLSEAVRPSEEKRGRADDSVRENDEDWLRYSPSQGSDHAVEERVNFVKEKMLSRYASEIDGECMPVTAPNGDRVYAKLNRSEGEERLKKLDVRANSHDLISEPINILFEKLEQEAFTKTLKASTECESVPDVPETPVVHEKLWVDKYTPKSFTELLSDEHTNREVLLWLKQWDSSVFGSEIRSTSDEVLSALKRHSTVAHHQKPLDSKFSRMKRGPKWSNNTYRHSKSMDETGNSNSIQDILNKKSKHIGPPEQKILLLCGPPGLGKTTLAHVAGRHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVMSDSRPKCLVVDEIDGALTDGKGAVEVLLKMVSAEKKSDVGKETLAKEHPGRKSSKKGRHTTSLSRPVICICNDLYAPALRPLRQVAKLWEDDGVSSSHTGFTYLFNQQLAVWLKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLSKKKETLNAFPFVCCWKNQRIVLYVRGREYISKTCLILASLIDYQEKYLAAVFFGFEDYAMKNKINGFSKFDIGSQVVGRKDVSRNVLDVWKEVFQRKKTKMERKSCSSKPFEFNSLYSLLSNRGDGDLILDGIHENILQLSYHDPVMQKTVKCLNSLGVYDLLHQYIMRTQQMPLQVYLPSIAITVNRLVAQVQKPNIEWPRSYQRFRTMMTEKMDILNTWHYKIPPQIARHLSAVSFVEDLISPLLHILTPPSLKPVALQLLSDKEKKDLVQLVSTMVSYSITYKNTKSDVLPNSLRHVVADDLSLDPPIGGFINFKDYTSNHYVLSLAMKQIIVHEVEKQKILQVNIDRHSGNESSSGRHELIEAGTSNAQSSKINHAAEISVKNIQNENNIWEARKYNANAAIVSPNLHPDKGVTDNVKLLNTGSMKKPSAGSFFDRFRKLSSKGLQSDDRTEKKEASLEIDSRPLLFKFNECKIILCGVEVHSFKGIGYVSKENFRSHSMHFSLLKHNGKKPYQSKAKMFKASAIGKLVLKPCYLTV 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0416 1063 MobiDBLite consensus disorder prediction 275 297 - -
Sto3g0416 1063 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 7 998 - -
Sto3g0416 1063 SMART AAA_5 314 464 IPR003593 -
Sto3g0416 1063 CDD HLD_clamp_RFC 484 530 - -
Sto3g0416 1063 Gene3D - 201 461 IPR027417 -
Sto3g0416 1063 MobiDBLite consensus disorder prediction 66 89 - -
Sto3g0416 1063 CDD AAA 313 403 - -
Sto3g0416 1063 Gene3D - 477 538 - -
Sto3g0416 1063 MobiDBLite consensus disorder prediction 24 41 - -
Sto3g0416 1063 Pfam ATPase family associated with various cellular activities (AAA) 318 434 IPR003959 GO:0005524|GO:0016887
Sto3g0416 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 528 IPR027417 -
Sto3g0416 1063 MobiDBLite consensus disorder prediction 1 96 - -
Sto3g0416 1063 MobiDBLite consensus disorder prediction 261 297 - -
Sto3g0416 1063 MobiDBLite consensus disorder prediction 410 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0416 284 417 Core DNA Replication Machinery Family AT1G63160 31.655 8.63e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0416 K11269 - gmx:100785041 1115.52