Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0379 ATGAATGGTTCTGCAAGTATTGAGGCAGAGGACTCTGAGTTTGTGGAAGTTGATCCTACTGGAAGATATGGACGATACAACGAAATTCTTGGCAAAGGAGCTTCAAAGACAGTCTACAGAGCATTCGATGAGTACGAGGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTACGATTTTCTGCAGAATCCTGAAGATCTTGAGAGATTGTACTGTGAAATTCATCTTCTCAAGACTTTGAAACACAAAAACATCATGAAATTCTATACTTCATGGGTTGATGCTGCCAATAGGCACATTAACTTTGTCACTGAGATGTTCACCTCTGGGACTCTCAGACAGTACAGGATAAAACACAAAAGAGTTAACATCAGAGCTGTGAAGCATTGGTGCAGGCAAATTCTAGAAGGGCTCCTCTATCTTCACAGTCATGATCCTCCTGTGATTCACAGAGACCTCAAGTGTGACAACATTTTCATCAATGGCAACCAAGGAGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTTCGAAAGTCTAATGCTGCTCGCTGTGTTGGCACGCCTGAGTTTATGGCTCCAGAAGTGTATGAGGAGGATTATAACGAATTGGTTGATATATACTCTTTTGGAATGTGTATCTTGGAGATGGTCACATTTGAATATCCTTATAGTGAATGCACCCATCCTGCTCAAATTTACAAGAAAGTTGTCTCTGGGAAGAAACCAGAATCACTATACAAAGTAAAGAATCCTGAGGTTCGTCAATTTGTAGAGAAATGCTTAGCAACTGCGTCCCTCAGGCTTTCTGCTAAGGAACTTCTGGAAGACCCTTTTCTCCAAATTGATGATTATGGGTCTGAGATGAAAACAATTCATTATCAAGGAGATGTCTATGAAGTAACCCCATTAGTTAGACAACCTCTTGATGGAGTTCACAACAGCAACAACTCATTCATCAATGAGTACACTGATTATCTCAGTGGTTATGGCCCTGAATCTGAGTTAACCAGTGAGATTGATCTCTTTGAATGTGAAGATGATGATAATTTGGCTGAAGTTGACACAGCAATTAAaggaaggagaagagaagaTGATGGCATCTTTCTGAGACTCAGAATAGCAGATCAGGAAGGCCGAGTTAGAAACATCTACTTCCCATTTGACATCGATACTGATACGGCACTGAGTGTTGCAACTGAAATGGTAGCTGAGCTAGACCTTACTGATCAAGATGTAACCAAAATAGCAGACATGATAGACAATGAAATCTCAAACTTGGTCCCAGAGTGGAAAACTGGACTCAGAATGGAGGAAATTCCAGAATGCACAAGTGAAGGTTTATGCCATAATTGTGCTTCAAATGGTACCTTCTTTGATTATGTATCATCAAACAGCCCATCAGCCCAAAATCTGCAATTTCTTCATTGTTCCAGAAATGGCTGCGCTGCAGTTCATGGCCGGTTCGAAGAGATCACATACCAAGTTGAAGGGCATGAAAATTGTACTACTACACAAGGAGCAGTACCAGCTGCACCATCAAGCCAATCCGCTGGCCTTCACTATACTGATATCTGGGCTCAGAGAGATGAACCAGAATTAAGTTCGGAGGAGTTAAGAGATATACATTGTGATAAATCACAAGAGGCTTCAAACCAATCAACAAGTAAGGAGGATGAGAGAATTATCAGTGTGTATGACCAAAGGGATCCCAACACAAAGCCCACATCTTCTTCTAGTAATGGATTAGATTGTGTTCTCTTGGACTATGAAAATGAAATTAGGCAGGAATTGAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGAGAGCTTAGGGACCAGCAATTAGAGCATAAGAAATATGTTGGGGTTCCAAAGCTATCAGTCACAAACCAATTGAAGATAAAGAACAGAAAACCAGTCTTGGGGCATTGGGCCTCCAAGAAGAGATATTCAGTTGATGGTGAGAAGAATAAGAAGTTTCCCATAACAGCTAATCAAATGGTGCAAGAGCAAGATGTGGATGAGACTAGTGGATCTAATAGTCCTGATCAAATGGTCACAGCCAAGGATTTTTATGCCGGAGCTTTGCTTCCACACTCCCTCCATAGAGCGACGTCTCTGCCAGTTGATGCAATAGATGTGTAG 2154 0.4095 MNGSASIEAEDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDAANRHINFVTEMFTSGTLRQYRIKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPESLYKVKNPEVRQFVEKCLATASLRLSAKELLEDPFLQIDDYGSEMKTIHYQGDVYEVTPLVRQPLDGVHNSNNSFINEYTDYLSGYGPESELTSEIDLFECEDDDNLAEVDTAIKGRRREDDGIFLRLRIADQEGRVRNIYFPFDIDTDTALSVATEMVAELDLTDQDVTKIADMIDNEISNLVPEWKTGLRMEEIPECTSEGLCHNCASNGTFFDYVSSNSPSAQNLQFLHCSRNGCAAVHGRFEEITYQVEGHENCTTTQGAVPAAPSSQSAGLHYTDIWAQRDEPELSSEELRDIHCDKSQEASNQSTSKEDERIISVYDQRDPNTKPTSSSSNGLDCVLLDYENEIRQELRWLKAKYQMQLRELRDQQLEHKKYVGVPKLSVTNQLKIKNRKPVLGHWASKKRYSVDGEKNKKFPITANQMVQEQDVDETSGSNSPDQMVTAKDFYAGALLPHSLHRATSLPVDAIDV 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0379 717 CDD STKc_WNK 22 281 - -
Sto3g0379 717 MobiDBLite consensus disorder prediction 546 582 - -
Sto3g0379 717 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 370 425 IPR024678 GO:0004674|GO:0005524
Sto3g0379 717 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 1 706 - -
Sto3g0379 717 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Sto3g0379 717 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Sto3g0379 717 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0379 717 Gene3D - 349 434 - -
Sto3g0379 717 Coils Coil 596 616 - -
Sto3g0379 717 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 706 - -
Sto3g0379 717 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0379 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sto3g0379 717 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0379 717 MobiDBLite consensus disorder prediction 546 568 - -
Sto3g0379 717 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0379 Sto-Chr3 2527807 2530639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0379 1 493 MAP Kinase Kinase Kinase AT3G22420 60.075 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto3g0379 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0379 K08867 - gmx:100804179 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0379 3 2527807 2530639 Sto3g0379 3 2527807 2530639 ECH