Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0344 TTGGATGATACAAATGTATTACATAACCAGAGCAATGAATTGCCTAGAGACTATGATCTTGAGGGTGCATCCTTCCCGAATGAAGGTCATTTTCGCCCACCGCTACCCCATGGACTTGTTTATAAGCAAAGGCTTCCTGCTGCTTCTCACCATGTGCCTCAAGGTGATATGGTTTTAGATGTAGTTCCTGATCCTCCAGAAGATGTTTTTGTTGGCCAGACACTTAAGCTTTCTCCAGCCCAGTTAGCAGAATTTCAAAAGCACAGTAGAAGTATTGAAATTGACAGATTGCAAGACTTTGTACAAAGAGATATATTAGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCACTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAATCAACAATTCCCTCAAGGCTACCACTGACATTGGGGAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAACTGGAATTTGGATAAAATGAAATGGGAGTTGGTAGATATGGGTAGCTTGAACGGAACACTTTTGAATTCTCAACCAATCAACAATTTGGACACTGGAAGCAGGCATTGGAGCGATCCAATTGAGCTTGGTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAGGATTCACATTCCCTTTGGAGTAGGTATGGCATCAGATCCAATGTCTATGCGTCGAGGAGGGAAAAAGCTGCCCATGGAAGATGTTTGCTATTATCAATGGCCTCTATTTGGACTTGATCAGTTTGGACTGTTTGTCATTTGTGATGGGCATGGTGGAGATGGGGCTGCTAGATCTGCAAGCAAACTTTTCCCTGAGATAGTTGCAAACATATTATCGGATACACTAAAACGAGAGAAGGTTGTGTTACTCCGTGATGCTTCAGACGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCATGAATCACCATTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGATGACAATTTCTTTGCGCAATGTGCAAATGTCGGAGATTCTGCCTGTATTATGAATGTTGATGGGAAAGAAATTAAGATGACAGAAGATCATAAGATAACAAGTTATTCTGAAAGGCTCCGAATTGAAGAGACAGGTGAACCTTTGAGAGATGGGGAAACACGTCTGTATGGCATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTTAAACAGCAGGATTCTCGGTTCAGTTCAGAGCCTTATATAAGTCAAGTTGCTCACATTGATCAGGCAAGCAAGGCTTTTGCCATACTAGCAAGTGATGGGTTATGGGATGTCCTCGGCACGAAGAAAGCAATTCAGCTAGTACTTCAGATGAGAGAGAAATACTCCACAGATGGAGTTAATTCAGCAGAAAAGATTGCAAATTTGTTGTTGAGTGAGGCTAGAACACTCAGAACAAAGGATAATACATCTGTAATTTTCTTAGATTTTAATACCTTCCCCAGATTTTCTTGTAAAGCCGAGTCTTAA 1557 0.4078 LDDTNVLHNQSNELPRDYDLEGASFPNEGHFRPPLPHGLVYKQRLPAASHHVPQGDMVLDVVPDPPEDVFVGQTLKLSPAQLAEFQKHSRSIEIDRLQDFVQRDILDQRSCLTLEVITGPSCGLRCSVQSTIPSRLPLTLGRVSPSDLLIKDSEVSGKHALINWNLDKMKWELVDMGSLNGTLLNSQPINNLDTGSRHWSDPIELGNGDIITLGTTSKVIVHITSQNRIHIPFGVGMASDPMSMRRGGKKLPMEDVCYYQWPLFGLDQFGLFVICDGHGGDGAARSASKLFPEIVANILSDTLKREKVVLLRDASDVLRDAFSQTEACMNHHYEGCTATVLLVWADGDDNFFAQCANVGDSACIMNVDGKEIKMTEDHKITSYSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVAHIDQASKAFAILASDGLWDVLGTKKAIQLVLQMREKYSTDGVNSAEKIANLLLSEARTLRTKDNTSVIFLDFNTFPRFSCKAES 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0344 518 SUPERFAMILY SMAD/FHA domain 110 221 IPR008984 GO:0005515
Sto3g0344 518 CDD FHA 112 220 IPR000253 GO:0005515
Sto3g0344 518 Gene3D - 242 512 IPR036457 -
Sto3g0344 518 Pfam FHA domain 139 214 IPR000253 GO:0005515
Sto3g0344 518 PANTHER PROTEIN PHOSPHATASE 2C 70 2 517 - -
Sto3g0344 518 Gene3D - 107 241 - -
Sto3g0344 518 SMART PP2C_4 228 504 IPR001932 -
Sto3g0344 518 PANTHER PROTEIN PHOSPHATASE 2C 2 517 IPR015655 GO:0004722|GO:0006470
Sto3g0344 518 SMART FHA_2 137 189 IPR000253 GO:0005515
Sto3g0344 518 ProSiteProfiles Forkhead-associated (FHA) domain profile. 138 189 IPR000253 GO:0005515
Sto3g0344 518 Pfam Protein phosphatase 2C 242 499 IPR001932 -
Sto3g0344 518 CDD PP2Cc 242 506 IPR001932 -
Sto3g0344 518 SUPERFAMILY PP2C-like 247 508 IPR036457 -
Sto3g0344 518 ProSiteProfiles PPM-type phosphatase domain profile. 234 506 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0344 Sto-Chr3 2261887 2267675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0344 2 508 PP2C-type Phosphatase Gene Family AT5G19280 60.600 0.0 637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0344 3 2261887 2267675 Sto3g0344 3 2261887 2267675 ECH