Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0338 ATGCAGCTTGATCTGGAATCATTGTCAGAAGCAACATCTGGTGCCATTGGATCCCTTGTTAGCACTACCGTCTTGTACCCACTTGATACTTGCAAGACCAAATACCAAGCTGAAGTTCAAGCTCACCAACACCGAAAATACAGGAATATTTCTGATGTTTTATGGGAAGCAATCTCTACTCGCCAAGTGCTTTCGTTGTACCAAGGCCTTGGGACGAAGAATGTCCAGTCCTTCATTTCGTCGTTTCTCTATTTCTATGGATACAGCTACTTTAGGAGGCTATACTTGAACAAAACTGGTAAGAAGACCATTGGAACAAAAGCAAACTTGCTTGTTGCTACTGCTGCTGGGGTCTGTACAATAGTAGTAACCCAGCCCTTAGATACGGCAGCCTCAAGGATGCAGACAAGTGAATTTGGAAAATCCAAGGGATTTTGGAAAATCCTTTCAGAAGGTACCTGGAGTGAGGCTTTTGATGGTCTTGGCATATCTCTTATTTTAACATCAAATCCGACTATTCAGTATACTGCATTTGATCAACTGAAACAGAGACTACTAAAGGGCAAGGTGAGCAAGAAAATAGGTCCGAAGTCATCCCCAGAAGCTCTTTCTGCCTTGTCTGCTTTCATGTTGGGTGCAGCCTCAAAATGTGTTGCTACGTGCTTGACATACCCCGCTATCAGGTGTAAGGTTATGATTCAAGCCGCTGAGTCAGATGACAATCAAAGTACAGAAGCCGAGCGGAAGGAACAACGGACAATCTCAGGTGCACTTCGTACTATTTGGAGAAGAGAAGGCCTGATGGGATTTTTTAATGGATTGCAGGCACAGATATTGAAAACTGTTCTTAGCGCAGCACTACTTCTGATGGTAAAGGAGAAGATCACGAAGACCTCATGGATTTTGATGCTTATGATTGGAAGGTACCTATCTGCTGCCAATCCTCCTAAATTAAAGAGCGCTTGA 966 0.4348 MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHQHRKYRNISDVLWEAISTRQVLSLYQGLGTKNVQSFISSFLYFYGYSYFRRLYLNKTGKKTIGTKANLLVATAAGVCTIVVTQPLDTAASRMQTSEFGKSKGFWKILSEGTWSEAFDGLGISLILTSNPTIQYTAFDQLKQRLLKGKVSKKIGPKSSPEALSALSAFMLGAASKCVATCLTYPAIRCKVMIQAAESDDNQSTEAERKEQRTISGALRTIWRREGLMGFFNGLQAQILKTVLSAALLLMVKEKITKTSWILMLMIGRYLSAANPPKLKSA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0338 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 298 IPR018108 -
Sto3g0338 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Sto3g0338 321 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Sto3g0338 321 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 319 IPR045900 GO:0005347|GO:0006635|GO:0015217
Sto3g0338 321 Pfam Mitochondrial carrier protein 7 98 IPR018108 -
Sto3g0338 321 Pfam Mitochondrial carrier protein 104 187 IPR018108 -
Sto3g0338 321 Pfam Mitochondrial carrier protein 203 297 IPR018108 -
Sto3g0338 321 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 319 - -
Sto3g0338 321 Gene3D Mitochondrial carrier domain 2 299 IPR023395 -
Sto3g0338 321 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0338 Sto-Chr3 2221348 2223373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0338 23 317 Chloroplast and Mitochondria Gene Families AT1G25380 26.059 4.16e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0338 - - gmx:100795330 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0338 3 2221348 2223373 Sto3g0338 3 2221348 2223373 ECH