Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0318 ATGGGCCTCACTATGGACCCTTTCTTTCCCCACCACCGCAAAGACAAGGTCGTCGTCATTATGGGCGCCACCGGCACCGGCAAGTCCAAGCTCGCCATCGACCTCGCCACCCTCTTCCCCCCCGCCGAGATCGTCAACTCCGACAAAATGCAAGTCTACAAAGGCCTCGACATCACCACCAACAAGGTCACCGAAGAAGAATGTCACGGCGTCCCACACCACCTCCTCGGCATCGCCGATCCCAACTCCAATTTCACCGCCGATGACTTCACCCGCCACGCCTCCTCCGCCATTCACTCCATCGTCCACCGAGATTGCCTCCCCATCGTCGCCGGCGGCTCCAATTCCTACATCGAAGCCCTCGTCCAAGACGACGCTGCGTTTCGCTTGAAATTCGAGTGCTGCTTCCTCTGGGTGGATGTCGCTCCTCCCGTGCTGGATTCGTTCCTGTCGAAGCGGGTGGACCGGATGATCGAATCGGGTCAAATCGAGGAGGTCCGTCAAATTTTCGACCCGGAAGCGGATTACAGTATAGGAATCCGAAGGGCGATAGGAGTACCGGAATTCGATCAGTATTTCAGAACAGAGGGTACCGCGGATGAAAGAAGCAAGAAGAAGTTTCTAGAGGCTGCCATTGCGAAGATCAAATCGAATAATTGCACACTCGCTCACCGTCAGCTTCAGAAGATTCATCGTCTTCATTCGATGTGGAAGCGAAATATGTATCGCCTTGATGCCACGGAAGCATTCAAGAAGAGCGGCGAGGAAGCAGAGGAGGCATGGGAGAATCAAGTGGTGGCCAAGAGCCATAGGATTGTGCACAAGTTCTTGTACGAGGAAAGTGCGGTGGTTCCGGCGGCCACCGTAATGGCGGCGGCGCCGCCAAAGCAGTCCCAATTATCGTTGGATCAAGATCAAGGGAATTACGATGAGATAGATCGAGAAGCCTAG 951 0.5489 MGLTMDPFFPHHRKDKVVVIMGATGTGKSKLAIDLATLFPPAEIVNSDKMQVYKGLDITTNKVTEEECHGVPHHLLGIADPNSNFTADDFTRHASSAIHSIVHRDCLPIVAGGSNSYIEALVQDDAAFRLKFECCFLWVDVAPPVLDSFLSKRVDRMIESGQIEEVRQIFDPEADYSIGIRRAIGVPEFDQYFRTEGTADERSKKKFLEAAIAKIKSNNCTLAHRQLQKIHRLHSMWKRNMYRLDATEAFKKSGEEAEEAWENQVVAKSHRIVHKFLYEESAVVPAATVMAAAPPKQSQLSLDQDQGNYDEIDREA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0318 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 174 IPR027417 -
Sto3g0318 316 Gene3D - 14 277 IPR027417 -
Sto3g0318 316 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 10 283 - -
Sto3g0318 316 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 283 IPR039657 -
Sto3g0318 316 MobiDBLite consensus disorder prediction 293 316 - -
Sto3g0318 316 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 143 241 - -
Sto3g0318 316 Pfam IPP transferase 51 124 - -
Sto3g0318 316 Pfam IPP transferase 131 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0318 Sto-Chr3 2052998 2055694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0318 131 281 C2H2 Transcription Factor Family AT2G27760 30.337 5.58e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0318 3 2052998 2055694 Sto3g0318 3 2052998 2055694 ECH