Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0296 TTGCCCATCCTTCCTCCTGAACTCATCGTCGAAATCCTTTCCTGGCTTCCTGTGAAATTCCTTCTGCGATTCAGGTGCGTATGCAAGTATTGGAAGTCTTTGATCTCCGATCCCCAATTCGCTAAAAAGCACCTTCGTATGTCCACTATGGACACCAAATTCACCCGCCATAACATCATTTTCTGCTTCGCCAAACCTAGGTTTACTGTCAGATCTTGCTCTCTTGATTCTGTATGCAATAACCTCCCTACTAGTGCCGTAAAGATGAAATACCCTTTGAAGGCCCGAAACCGATATGATTTGCTTGTAGGCTCTTGTAACGGCTTGCTCTGTTTCGCTATTAAACAAAGTCATGTCCTCGTGTGGAATCCGTCTATTAGAATCTCTAAGAAATCGCCGTATTTGGATATTCAACGACGGGAGGGAAGTTATACGATATATGGATTTGGTTATGATCATTTAACTGATAAATATAAGGTGGTAGCAATTTTTTGCTATGACAGTGATGGTAGAGGCGCATATAAAACTGAAGTTAAGGTTTACACTCTGGGTTCCAATTCTTGGAGAAGGATTCAGGAGTTCCCTTCCGGTGTTCCGTATGATGACATGGGAAAATTTGTGAGTGGAACACTTAACTGGTTGGCAAGTAGAACTAGTGCTTCACGTTCTTCATTTGTTGTTATTTCTCTTGATTTAGGGAAGGAGTCGTATGTAGAACTGTCACAGCCTGATTATGAAGCAGGGGTATCTACCTTGACCTTGGGGGTATTAAGAGACTGCTTGTGCATACTTTCTCACTATGGCACATATTCGAATGTGTGGATTATGAAGGATTTTGGAGTTAAAGAGTCTTGGACTAAACTGTTAAGAATTCCTTACTTGGTATATCCTCTTTCTCTTCTGTGTACAAAGGATGGCTGTATTTCTGAGAGTAGTGAAATACTGTTGCAGTATGGGTCGAACTTACATTTTTATGACTCCAGAAATTCCACGTTTGTGCGTCCTGAGATTCAAAATGCTAATGGTTGGCATGATGCAGAGGTCTATGTTGAGAGTCTGATCTCACCTGGGTCTTAA 1077 0.415 LPILPPELIVEILSWLPVKFLLRFRCVCKYWKSLISDPQFAKKHLRMSTMDTKFTRHNIIFCFAKPRFTVRSCSLDSVCNNLPTSAVKMKYPLKARNRYDLLVGSCNGLLCFAIKQSHVLVWNPSIRISKKSPYLDIQRREGSYTIYGFGYDHLTDKYKVVAIFCYDSDGRGAYKTEVKVYTLGSNSWRRIQEFPSGVPYDDMGKFVSGTLNWLASRTSASRSSFVVISLDLGKESYVELSQPDYEAGVSTLTLGVLRDCLCILSHYGTYSNVWIMKDFGVKESWTKLLRIPYLVYPLSLLCTKDGCISESSEILLQYGSNLHFYDSRNSTFVRPEIQNANGWHDAEVYVESLISPGS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0296 358 SMART fbox_2 4 44 IPR001810 GO:0005515
Sto3g0296 358 Pfam F-box domain 4 40 IPR001810 GO:0005515
Sto3g0296 358 TIGRFAM F_box_assoc_1: F-box protein interaction domain 104 310 IPR017451 -
Sto3g0296 358 ProSiteProfiles F-box domain profile. 1 44 IPR001810 GO:0005515
Sto3g0296 358 PANTHER PROTEIN, PUTATIVE-RELATED 2 336 - -
Sto3g0296 358 PANTHER OS02G0783600 PROTEIN 2 336 - -
Sto3g0296 358 Gene3D - 1 40 - -
Sto3g0296 358 SUPERFAMILY F-box domain 3 62 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0296 Sto-Chr3 1947062 1948138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0296 148 316 Carbohydrate Esterase AT1G25141 28.814 6.87e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0296 - - gmx:100780337 391.349