Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0285 atgGAGTTGGATAATGCTGCAATCTGCTCGGAGAAGGTTGGTGGAAACAATGGGAGTGAGCAATTGGGAAAGAAAGCTGTGATTTCTGATGATGGAAATCGGGAGTCGGATGAGATTGGCTCTCCTCGAGAAATAGAGATTGGTCTGTTTTTCTGCCCTGCTTTTCTGTTCTTGATCTTGATTTGCGAAATTTTATACCTTTTGAATATAGCATGTCAGAATAGTATGTTACCAGATAAGCATAAGCATACTGCATCCTCTACACGACAGAGGGGAGTTAAAATTATTGGTGATGGTTCTTTAAAGTTACAAGCAGCGGTCACAGACCCTCTTCCTGAGATATTGCAGAAATCTGACATTGTAAGATCTGAATTGGCAATGAAGGGCATTAGTCATGAACCACCTCTTGAAAATCAGAGTAGAGATGTTGATATACCAGAATCAAATACTTGCAGGAGCATTGTGCTTTATCAACCTATTGATGCTCTTTTAAAGAACTCTTTTGTTAATCAGAGCAATGTTCATTGCCCCAACTTAATGGAACAAAATAGTACTGCCCATACTCGTGAGTGGGATGATTCAATAGATAACTTGCCTGAAGGAACGCCTAGGAAAAGGAGGAGAGGCAAAAGATGGACTACATTGGAAGAGCATACGTTAGTGGCTGGTGTAAATAAGTTTGGCAAAGGGAACTGGAAGACTATCTTAAATTTCTATAGCGAGATATTTAAGAAGGCAGACAGAACTGAAgttgATTTGAAGGACAAGTGGAGAAACATGAAACTTTGCCCTCAGAAACTTTTGATTGCTCCAATCCTTGCTGGAAATGCCGCCAATGCAGCTGTAGCATCTGAAGAAAAATCtgcatatattttgttttttgaaaatgCTGTATTAGGAGAAAAAAACTTGAATCTTGACTAG 924 0.3853 MELDNAAICSEKVGGNNGSEQLGKKAVISDDGNRESDEIGSPREIEIGLFFCPAFLFLILICEILYLLNIACQNSMLPDKHKHTASSTRQRGVKIIGDGSLKLQAAVTDPLPEILQKSDIVRSELAMKGISHEPPLENQSRDVDIPESNTCRSIVLYQPIDALLKNSFVNQSNVHCPNLMEQNSTAHTREWDDSIDNLPEGTPRKRRRGKRWTTLEEHTLVAGVNKFGKGNWKTILNFYSEIFKKADRTEVDLKDKWRNMKLCPQKLLIAPILAGNAANAAVASEEKSAYILFFENAVLGEKNLNLD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0285 307 CDD SANT_TRF 210 261 - -
Sto3g0285 307 Pfam Myb-like DNA-binding domain 210 261 IPR001005 -
Sto3g0285 307 SUPERFAMILY Homeodomain-like 206 262 IPR009057 -
Sto3g0285 307 SMART sant 208 263 IPR001005 -
Sto3g0285 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 266 IPR017930 -
Sto3g0285 307 Gene3D - 212 272 - -
Sto3g0285 307 ProSiteProfiles Myb-like domain profile. 204 261 IPR001005 -
Sto3g0285 307 MobiDBLite consensus disorder prediction 186 203 - -
Sto3g0285 307 MobiDBLite consensus disorder prediction 185 210 - -
Sto3g0285 307 PANTHER MYB TRANSCRIPTION FACTOR 100 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0285 Sto-Chr3 1885411 1888058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0285 211 264 Single Myb Histone (SMH) Gene Family AT1G17520 46.296 5.43e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto3g0285 Myb_DNA-binding 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0285 - K11111 vun:114187915 187.578