Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto3g0264 | ATGGCGAGATACAGAAGCCGGAGCAGAAGCTACAGCCCTCGCAGGCGAAGCAGGACCCCACCACGTGGACGCAAGCGCTACGATGATGAACCTCGCGATCGCAGGTCTTACAGAGACCGCCGCTCTCCGGCACCTTCTGGCTTGCTTGTTCGTAATCTTCCCCTTGATGCTAGGCCAGAAGATCTTAGGGGCCCATTTGAGCGCTATGGTCCTGTGAAAGATGTTTATCTTCCTAAGAATTATTACACTGGtgaGCCCCGGGGCTTTGGATTTGTAAAATTTCGATATGCTGAAGATGCTGCTGAAGCAAAGCAACAACTTAATCATACTGTTATTGGTGGGCGTGAAATAAGAATTGTGTATGCTGAGGAAAATAGGAAAACTCCTCAAGAAATGCGTGTGAGTTCTCGCGTAAGTGGTCGATACGGAGGAAATGGTAGAAGGAGAACTCCCACAAGATCCCCAAGACGCCGATATCGTTctCACTCGCGGTCTCTATCACCAGTTAGAGATGACTCGAGGGATCACAGGGGCAAGGACGATGATTATTCTCCTGAGAGATCAAGATCTTATTCTAGGTCTCCTTCACCTCGTGGTGGGAAGGATTACAGGAGGTCCCCAAGTCCAAGGGAGAATGGTCGGAGTCCTGATGATCGGAGGGATCAAACACATAGCAGGTCGGAGAGTCCTCAAGGTAATGGTCGCAGTCCCTCAAGGTCTCGTTCGCGGTCATACAGGTAA | 741 | 0.5007 | MARYRSRSRSYSPRRRSRTPPRGRKRYDDEPRDRRSYRDRRSPAPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPKNYYTGEPRGFGFVKFRYAEDAAEAKQQLNHTVIGGREIRIVYAEENRKTPQEMRVSSRVSGRYGGNGRRRTPTRSPRRRYRSHSRSLSPVRDDSRDHRGKDDDYSPERSRSYSRSPSPRGGKDYRRSPSPRENGRSPDDRRDQTHSRSESPQGNGRSPSRSRSRSYR | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto3g0264 | 246 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 1 | 242 | - | - | |
Sto3g0264 | 246 | SMART | rrm2_1 | 47 | 120 | IPR003954 | GO:0003676 | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 164 | 188 | - | - | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 227 | 246 | - | - | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 198 | 226 | - | - | |
Sto3g0264 | 246 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 48 | 118 | IPR000504 | GO:0003723 | |
Sto3g0264 | 246 | SMART | rrm1_1 | 47 | 120 | IPR000504 | GO:0003723 | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Sto3g0264 | 246 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 46 | 124 | IPR000504 | GO:0003723 | |
Sto3g0264 | 246 | ProSitePatterns | Protamine P1 signature. | 2 | 12 | IPR000221 | GO:0000786|GO:0003677|GO:0005634|GO:0007283|GO:0035092 | |
Sto3g0264 | 246 | PANTHER | SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL28 | 1 | 242 | - | - | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Sto3g0264 | 246 | MobiDBLite | consensus disorder prediction | 126 | 246 | - | - | |
Sto3g0264 | 246 | Gene3D | - | 2 | 135 | IPR012677 | - | |
Sto3g0264 | 246 | SUPERFAMILY | RNA-binding domain, RBD | 45 | 150 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto3g0264 | Sto-Chr3 | 1764346 | 1768070 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto3g0264 | 50 | 108 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 45.763 | 2.45e-07 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto3g0264 | K12900 | - | gmx:100788749 | 283.878 |