Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0245 ATGAACCAGTACCACATCTACGAAGCCATTGGTCGTGGCAAACACTCGACTGTGTacaaaggaaggaagaagaagacgatTGAATATTTTGCCATTAAAAGTGTTGATAAGTCTCAGAAAAGCAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTAGATCACCAAAATGTTCTCAAGTTTTATTCTTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTATTGTGTGGGAGGAGATTTGCTTACCTTATTACAGCAGGATAGTCATCTACCGGAAGATTCAATTTATGATCTTGCCCATGACCTAGTCAAAGCTTTGCAGTATTTACATTCAAATGGAATAATATATTGTGACCTGAAACCATCAAATATCCTACTAGATGAAAACGGATGTGCGAAGCTATGTGATTTTGGTTTGGCTAGAAAATTGCGAGATATATCGAAAATTCCATCTTCCTCGTTGCCTCAAGCAAAACGCGGAACACCGTCTTACATGGCTCCAGAGCTTTTTGAAGATGGTGGAGTCCACTCTTATGCTTCTGATTTCTGGGCCCTGGGTTGTGTACTATATGAATGCTATGCAGGGAGACCGCCCTTTGTAGGAAGAGAATTCACTAAACTTGTAAAGTCCATTCTTTCAGATCCAACTCCTCCTCTCCCAGGTAATCCAAGTCGCccttttgtcaatttaattaattctctGTTGGTGAAAGATCCAGCTGAAAGAATACAATGGTCTGAGCTTTGCGGACATGCCTTTTGGAGGACCAAATTAAACTTAGTGCCTCTACCTGCTCAACCTGCATTTGATGATATGATAGAGCTACAAGCTAAACCATGCTTATCAGAACGCAATGGTGATAAATCTTCCCAGAACAGAACTCCTCCCAAATCTCGTGAAAAAGATGTGAGAGGACCAAGAGGCCATGAGACACCTACCAAAGGTACACCAAATGGCCATAGAATGCAGTCAAAAGGTTATGGAAGAACAGCTGAGGTGAAGCAAAAAGATGCTTCCAGTGCTAGTAAGGCTGTCAATCTTTTGAGACTCTCAAGGATAGCAAAATCAAATTTACAGAAGGAAAATGAGAAGGAAAATTATAGACGCCCATTGCCAAATAACTCTGAGAACGACTCTGAAGTTAAAATTGAGAATGTTGATATGGAGCttgattttaatgaaaataCTGAAGATGATGCACACGATGAAACTGATGGGTCTGACCATATAACTTCTGTGCCAGATGAGAAAATGTCCAATCTAAATcaggggaaaggagaggagatGGATAGTAATATACACCAGGTAGACAGCCCGGCTGTTGGTAACACACCCATCTCAGATGATTCAAGGTCATTTGATCAGGAACCAACTCCTGAGCATCCTGACATGTCTGCTATCTCTCCCAGTGTGAGCCCTCAAGTCAAGAAACATAGAGCCAAAGAAGAGTTGGGATCTGCTGTTGACTTTGACTCCTCAAGGTCATCTAGTAACATTTCCCAGGTTCTTTGGCATCAATCTGATCTTTCAGTCAGACCTGTAATGCCCAGCAGAAAAACTGATAAAGTTTCAGAAATCATCCCTTCACTTCCTTTTGATGCTTTGCCTGTGTCTGATTTTGTAAAGATGTCTAAAGAACAATTGGATGCAGTCCACAATCGAATTATAGCAATTTTCAACGGGAATTACAGCATTGGGGAAAAACAGAATGTGATTAGATATCTTGAAATGTTGAGCAGCAATGCCGATGCAGCTAATATCTTGACAAATGGACCAATAATGCTCATTCTTGTGAAATTGCTACGTCAGTCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTTATTGGTCTTCTGATTCGGCATTCTACTTATATTGACGACAGTTTAGCAAATTCTGGAATTTTGGGTTCATTGACTGATGGCCTTAGAGACAAGCAGGAAAAAGTGAGGAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATTTCTACCCAAAATGAGGACAGTAGAGATAATCAGCTTGAATCTCCATCTAAGGACAGTCGGGCTACATTTGGCTGGCAGGTTCCAAATTCGTTGATATCTTTTGTGTCATCACTTTTACGGAAGGGAGAGGATGATCTAACTCAATTGTATGCCTTGAGGACAATTGAGAATATTTGCAGTCAAGGAGGGGTTTGGGTGGGACGTTTTACCAGTCAAGATGTCATCTGTAATCTGTGCTATATATACAGGGCAGCTGGGAAACAAGAGAGCATGAGGCTTACTGCAGGATCATGCTTGGTGCGCTTTGTTCGTTTCAACCCTCCTAGCATTCAGCCAGTTATAGATAGACTCTCATTTAAGGACCTAGCATCTGCTCTTGTCAAGGGCAGCCCTCGTGAGCAGCAAATCAGCTTAAATCTTCTGAACATGGCAATGCTTGGAAGTCATATGATCACAAATATTGGAAGATACCTTTTACCACTTGCTGAGGATAAGAATCTGATTCCTAGTCTTTTGGCTCTTATTGAGCAGGGCAGTGAAGTTTTGAAGGGAAAGGCACTTGTCTGTGTGGCCCTTCTCTGTAAGAGTGGTAGAAGGTGGCTTCCACATTTCTTTTGCAGTGCGAAGTTACTTTCGGTGGTAGACAGGCTCGGAAAAGAGAAGGATGCCTATGTGAGGCAGTGCTTGGATGCATTCTTGCTTATTGTGGCCTCTACTATTCCAGGTTTACTGGATACTATAACAGGAGATATCCAGCAAATGATGGCAGGAAGGCGCCATGGACATATCTCATCCCTTACCAGCAGATCTGCTCCAAAAACCAACATTCATGCCTTTCCTGTTGTCCTTCATCTTCTAGGGAGTTCAACGTTTAAGCACAAAGTGGCGACTCATCAGGTCTTGCGGCAGTTGGCAAACCTTATTAGAATTGTGGAGACTCCATTTCAGGGCAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTGGAGTCTCTCGCAGAGGAGTCATCTGTGATTTTTGGGAACCCTGAAATTTTCCTACGTGAAATCCTCCCCAGTTTAACGGTTCTCTACAAGGGTAACAAGGATGGCGATGCAAGATTTTTGTGCCTTAAAATTCTTTTTGATGTAATGGTCATTCTTTTGAGTGAACCAATCGAAGATGAGCAAAGATTGAAGGACGTGAAATTCATATCAAATACCCGTTTTCTTCCTCTCTACCCAACCTTGATTGAAGATGAAGATCCTCTTCCTATGTATGCACAAAAACTTCTTGTGATGTTACTAGAATTCAATTTTATTACAATTCCTGACGTTCTTCAGCTGAAGACAATCTCTCAATGTTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCCAATGTTAACAATGTTAAGTTGTGTTTGGCTCTGGCTTCTGCTCCTGAAATGGATTCCAAGTTACTCTCTCAACTAAAAGTAGTTAGGAGGATTGGGAACTTTCTGGAATTTGTATATGCAAAAGGTATGGAAGATTTTCTGGAGCCAACTCTTGGACTGTGCAAGGCTTTTCTTGCACGTTCAGTCAGCTGTGGAAAAGGCTCCAGCGACTCAACAGAACCTACTCTCCTAGGTCAATGCCCTTCTGAAGTGAGTAGTGCAGTTGATCCCCAGCAATGTGTAAGAGATATAATGGACTTCGGAAGCAATGTTAGTGTTTTCCTGGATTTGAGTGGATCTACTGAAGCCAACATTGCTGATATAGCTTCTGAATGTGTAATTTTACTCTTCAAGGCTGCTCCTAGAGAAGCCACCGCTGGTCTACTAACCAAGCTTCCCAAGGTCAGTGTGATCCTAGAGTCCTGGCGTAAAGGCATCTCTCACTTATTGGTGCAACGAATGCTGCATGCCTTAGGATTTGCTTGCAGGCAATACTTATTGCACGCAATGATATTATCAATATCCATACCAGAAATTTCAAGAATTGAAGTGATTGTTTCCGAACTAAAAAGTTCAGGTGTACCTGATTTAGCCAAAACTGCTGCGCTGGCGGCTTTAGAATTGCAGCGGCTGCCTCGCTGCATTTAA 4071 0.4119 MNQYHIYEAIGRGKHSTVYKGRKKKTIEYFAIKSVDKSQKSKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLTLLQQDSHLPEDSIYDLAHDLVKALQYLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLRDISKIPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTKLVKSILSDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWSELCGHAFWRTKLNLVPLPAQPAFDDMIELQAKPCLSERNGDKSSQNRTPPKSREKDVRGPRGHETPTKGTPNGHRMQSKGYGRTAEVKQKDASSASKAVNLLRLSRIAKSNLQKENEKENYRRPLPNNSENDSEVKIENVDMELDFNENTEDDAHDETDGSDHITSVPDEKMSNLNQGKGEEMDSNIHQVDSPAVGNTPISDDSRSFDQEPTPEHPDMSAISPSVSPQVKKHRAKEELGSAVDFDSSRSSSNISQVLWHQSDLSVRPVMPSRKTDKVSEIIPSLPFDALPVSDFVKMSKEQLDAVHNRIIAIFNGNYSIGEKQNVIRYLEMLSSNADAANILTNGPIMLILVKLLRQSKASALRVQLASLIGLLIRHSTYIDDSLANSGILGSLTDGLRDKQEKVRRFSMAALGELLFYISTQNEDSRDNQLESPSKDSRATFGWQVPNSLISFVSSLLRKGEDDLTQLYALRTIENICSQGGVWVGRFTSQDVICNLCYIYRAAGKQESMRLTAGSCLVRFVRFNPPSIQPVIDRLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMITNIGRYLLPLAEDKNLIPSLLALIEQGSEVLKGKALVCVALLCKSGRRWLPHFFCSAKLLSVVDRLGKEKDAYVRQCLDAFLLIVASTIPGLLDTITGDIQQMMAGRRHGHISSLTSRSAPKTNIHAFPVVLHLLGSSTFKHKVATHQVLRQLANLIRIVETPFQGRDDFQITLLRILESLAEESSVIFGNPEIFLREILPSLTVLYKGNKDGDARFLCLKILFDVMVILLSEPIEDEQRLKDVKFISNTRFLPLYPTLIEDEDPLPMYAQKLLVMLLEFNFITIPDVLQLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMDSKLLSQLKVVRRIGNFLEFVYAKGMEDFLEPTLGLCKAFLARSVSCGKGSSDSTEPTLLGQCPSEVSSAVDPQQCVRDIMDFGSNVSVFLDLSGSTEANIADIASECVILLFKAAPREATAGLLTKLPKVSVILESWRKGISHLLVQRMLHALGFACRQYLLHAMILSISIPEISRIEVIVSELKSSGVPDLAKTAALAALELQRLPRCI 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0245 1356 SUPERFAMILY ARM repeat 547 1132 IPR016024 -
Sto3g0245 1356 CDD STKc_ULK4 3 257 - -
Sto3g0245 1356 Gene3D - 556 902 IPR011989 -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 359 385 - -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 439 455 - -
Sto3g0245 1356 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0245 1356 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sto3g0245 1356 MobiDBLite consensus disorder prediction 296 312 - -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 359 374 - -
Sto3g0245 1356 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1353 IPR044591 GO:0000911|GO:0000914|GO:0008017
Sto3g0245 1356 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 283 345 - -
Sto3g0245 1356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Sto3g0245 1356 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0245 1356 Gene3D Transferase(Phosphotransferase) domain 1 1 304 - -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 416 432 - -
Sto3g0245 1356 MobiDBLite consensus disorder prediction 399 476 - -
Sto3g0245 1356 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0245 Sto-Chr3 1659474 1665784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0245 1 258 AGC Kinase Gene Family AT1G45160 34.708 1.85e-37 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Sto3g0245 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0245 K17545 - gmx:100777288 2279.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0245 3 1659474 1665784 Sto3g0245 3 1659474 1665784 ECH