Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0240 CTGTACACGAAGTTGATGACGTCGTTGACCTCTGATCACGCTTCAGTGGTGTCAATGAACTTATTTGTGGCACTTCTTTGTGCTTGCATCATAATCGGTCATTTGCTAGAGGAGAACCGATGGATTAATGAATCCATCACTGCCCTTGTCATTGGTCTCTGTACTGGGGTTTTTATACTGCTTACAAGTGGAGGAAAAAGCTCCCATATATTAGTTTTCAGTGAAGATCTATTCTTTATTTACCTTCTTCCGCCCATAATTTTCAACGCCGGGTTTCAGGTGAAGAAAAAACAATTCTTTCGCAATTTTATCACCATCATGCTCTTTGGTGCAGTTGGCACTTTAATATCCTTTGCCATCATATCACTAGGTGCTATACACTTTTTACAGAAATTGGATATTGGATCCCTCAAGCTTGGAGATTATCTTGCAATCGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACCTTGCAGGTGCTTAATCAGGACGAGACACCATTATTATACAGCCTGGTCTTTGGGGAGGGGGTAGTAAATGATGCTACATCTGTGGTGCTCTTGAAAGCAATTCAGAACTTTGACCTCGCTCACATCGACTTGACAACTGGTTTACACTTGATTGGgaattttttctatttatttactgcaAGTACTGTGTTGGGAGTGTTAgCTGGATTGCTTAGCGCATTCATCATTAAAAAGCTTTATTTTGGCAGGTTGGCCAGGCATTCTACTGACCGTGAGGTTGCTCTTATGATACTCATGGCCTACCTTTCATACATGCTATCTGAACTATTTAATTTAAGTGCCATTCTGACCGTGTTCTTCTGTGGCATTGTCATGTCTCACTACACATGGCATAATGTGACTGAAAGTTCAAGAGTAACAACTAAGCATGCTTTTGCTACGTTGTCATTTATTGCTGAGATCTTTATCTTCCTTTACGTTGGAATGGATGCACTGGATATAGAAAAGTGGAGATTTGTACGTCAAAGCCCTGGAAAATCAATTGGAATCAGTTCAATGCTGTTGGCACTTATCCTAGTCGGGAGAGCAGCATTTGTTTTCCCTCTGTCCTTCATAGCCAACTTAGCCAAGAAGTCTCAATCTGAGAAAATCGAGCTAAAGCAACAAGTAACAATCTGGTGGGCTGGTCTTATGCGTGGAGCTGTTTCTATGGCACTCGCTTATAATCAGTTTACCAGGTCAGGCCATACTAAGTTGCGTGAGAATGCCATCATGATCACCAGTACTATCACAGTAATACTCTTCAGCACTGTGGTGTTTGGATTGATGACGAAGCCACTAGTGAGGTTACTGCTTCCTACATCAAAGCACATGAGCAGCATACCGTCCCCACCATCAACTCCTAAGTCATTCATTGTGCCACTTCTTGGGAATGAGAACGTGCGTCGCCCAAACAGCTTGCGTCTGCTTCTAAGCTTACCTACACGTGGTGTCCACCATTACTGGAGAAAATTTGATGATGCTGTCATGCGCCCCATGTTCGGTGGGCGGGGTTTTGTACCCTTTGTTCCTGGCTCACCCCTTGAACAGACTGATCACCAATGGCAGTAA 1581 0.425 LYTKLMTSLTSDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALVIGLCTGVFILLTSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFITIMLFGAVGTLISFAIISLGAIHFLQKLDIGSLKLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLLKAIQNFDLAHIDLTTGLHLIGNFFYLFTASTVLGVLAGLLSAFIIKKLYFGRLARHSTDREVALMILMAYLSYMLSELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFVRQSPGKSIGISSMLLALILVGRAAFVFPLSFIANLAKKSQSEKIELKQQVTIWWAGLMRGAVSMALAYNQFTRSGHTKLRENAIMITSTITVILFSTVVFGLMTKPLVRLLLPTSKHMSSIPSPPSTPKSFIVPLLGNENVRRPNSLRLLLSLPTRGVHHYWRKFDDAVMRPMFGGRGFVPFVPGSPLEQTDHQWQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0240 526 Pfam Sodium/hydrogen exchanger family 23 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Sto3g0240 526 PANTHER SODIUM/HYDROGEN EXCHANGER 3 4 526 - -
Sto3g0240 526 Gene3D - 138 189 - -
Sto3g0240 526 PRINTS Na+/H+ exchanger signature 146 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto3g0240 526 PRINTS Na+/H+ exchanger signature 106 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto3g0240 526 PRINTS Na+/H+ exchanger signature 77 88 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto3g0240 526 PRINTS Na+/H+ exchanger signature 91 105 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Sto3g0240 526 PANTHER SODIUM/HYDROGEN EXCHANGER 4 526 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0240 Sto-Chr3 1639335 1642754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0240 1 524 Antiporters AT3G05030 74.583 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0240 - - gmx:100791224 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0240 3 1639335 1642754 Sto3g0240 3 1639335 1642754 ECH