Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0230 ATGCGCCGGTGGCTTTGTTGTACTTGTCAGGTTGAGGAATCTTACCCATATGAAAATGAGCACCTTAAAAGCCCAAGAAGTTATGGAGACGGCAACCCAAAAGGCTCAAAGGCATCAGTTCCTGTCAAACCTGAAACACAAAAGACTGCACCACCTATTGAAGTGCCACCATTATCTTTAGATGAACTAAAGGAAAAGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGATCTTATGGGAGAGTATATTATGCAACTTTAAACAGTGGACAAGCTGTGGCTGTGAAAAAGCTTGATGTATCATCAGAACCTGAAACCAATGTTTCCATTGTCTCAAGAATGAAGCATGACAATTTTGTTGAGTTGCATGGTTACTGTGTCGAGGGAAATCTTCGTGTACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCTCAACCGGGGCCAACCCTTGATGGATGCAGCGAGTTAGAATGCATGTATGTTGAACATCACTTGGTAGAAGGGAGAGTATGCAATGACTGGTCAGTTGACACAAAGAGCGATGTCTATAGTTTTGGTGTCGTTCTTCTTGAGCTTCTGACAGGAAGAAAACCAGTTGATCACACCATGCCTCGTGGACAGCAAAGTCTTGTTACATGGCTAGCAGCCGTTTGCAGCACTTTGTGGCAGTATGAAGCAGAGTTTAGGCCTAATATGAGCATTGTTGTTAAAGCGCTTCAACCACTTCTGAAAACTCCAGCACCTGGCCTATGGTGCGGAGGGACCGGAGTCTTGGGGGAAAAGAGGTCGTTGTTGGCTGGAACGATAATGCGAACTATAACTCGAGGATCTCGCCGAATCCATTATCGCCGCCTCAGAGGTCTGCGGCGAGCGTTCCGAGGAGAGCTACAAAGAACAGAGATAGGGTTTGCAGGGAGATTGCCCAAGTGGTGGCCAACTCTTGTCACGCGTGCCGTTTCGACCGAGGATGAGCAGGAGTATAAGAGGGATGCATACAGACTAGTTCGAGGGCACCTAGTTACTCTACCTCCATTGAGATTAATGGTGAAGATTCTCGACAATTCCTTGCTGGGTTTTGCTGAAAACATTGGACTTGAAAGTAGTCGTGCTGCGACAATTGTGTCTGCAGCTGTTGCTGCACGCACACGCTCTTGTCTTCTGCAGGCTTGGGCTCTGGAAGTGCAAGGCAAACATGTCGAGGCTAAGTTGGAACTGTCAAAGATATGCCTTCTTCTGCGTATATTTCCTCCCGAGGAGTCCTCTCCAGAAATGGAGATGGTGGCTCGGGGCTTGGAGAAACACTTGAAACTAGAGCAAAGAAAACACCTTATGGATGTTTTTGCTCAAGTTTGTGGTGAGGACAGTCACAAGATTGCAAGAGAAGCCCTTGGTTTGGTGCGGATCTTTGAACTGAAATCGCCATAG 1470 0.4667 MRRWLCCTCQVEESYPYENEHLKSPRSYGDGNPKGSKASVPVKPETQKTAPPIEVPPLSLDELKEKTDNFGSKALIGEGSYGRVYYATLNSGQAVAVKKLDVSSEPETNVSIVSRMKHDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDGCSELECMYVEHHLVEGRVCNDWSVDTKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWLAAVCSTLWQYEAEFRPNMSIVVKALQPLLKTPAPGLWCGGTGVLGEKRSLLAGTIMRTITRGSRRIHYRRLRGLRRAFRGELQRTEIGFAGRLPKWWPTLVTRAVSTEDEQEYKRDAYRLVRGHLVTLPPLRLMVKILDNSLLGFAENIGLESSRAATIVSAAVAARTRSCLLQAWALEVQGKHVEAKLELSKICLLLRIFPPEESSPEMEMVARGLEKHLKLEQRKHLMDVFAQVCGEDSHKIAREALGLVRIFELKSP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0230 489 SUPERFAMILY Protein kinase-like (PK-like) 51 259 IPR011009 -
Sto3g0230 489 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Sto3g0230 489 ProSiteProfiles Protein kinase domain profile. 70 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0230 489 Gene3D Transferase(Phosphotransferase) domain 1 144 260 - -
Sto3g0230 489 Gene3D Phosphorylase Kinase; domain 1 37 140 - -
Sto3g0230 489 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 192 231 - -
Sto3g0230 489 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 230 262 - -
Sto3g0230 489 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 1 167 - -
Sto3g0230 489 Pfam Protein kinase domain 73 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0230 489 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 167 - -
Sto3g0230 489 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 192 231 - -
Sto3g0230 489 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 230 262 - -
Sto3g0230 489 MobiDBLite consensus disorder prediction 21 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0230 Sto-Chr3 1524053 1532168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0230 58 258 Strubbelig Receptor Gene Family AT1G11130 28.873 4.62e-22 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sto3g0230 Pkinase 6.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0230 K13436 - gmx:548003 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0230 3 1524053 1532168 Sto3g0230 3 1524053 1532168 ECH