Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0219 ATGGCTGTCTCTATGAATAACATGCTCCTTTGCTTACTATTATTGTGTCTACCAACTGTTTGTGTTTATGCCCAAACCAAAAGCCAATTAAGTGTTGGTGATTCTCTCTATGCAGGAAGTGGCAATTCCTCAGGCACATGGGTGGTTTCACCTTCTGGGGATTTTGCACTTGGATTTCAACCCCTTGAAGGTAATAATGGAGTGTTCTTGCTTTCCATATGGTATGAGAATATTCCAGAAAAAACCATAGTCTGGTATGCCAATGGAGACAATCCTGCTCCAAAAGGTTCAAAAGTAGAGCTTACTGCTGGAGGCCTTGTGCTTACTTTTCCTGATGGAAGAGAATTGcagaaacccgaaaccctttcTGGTAGTGTCACTCAAGGTGTTTTGAACGACTCCGGCAACTTTATTCTTCAAGATAAAACCTCTACTACTGCCTGGGATACCTTCAAGGATCCTAGAGACACTGTTTTGCCCTCCCAGTTTCTGGGAAACGGAGAAAAGCTTTCTTCTCGAAGGTCAGAGACAAATTTCACCAAGGGAAGGTTTCAGCTTGTTATGCAGGATGATGGTAATCTTGTGATGCATTCAATAAACTTACCATCTGAGTATGCTAACCAAAATTATTATGAAAGTGGTATCATTGAATCCAACTCATCAAGTGTTGGCCTTCAGTTAGTCACGTTTATGTTGAGAGACAGCAATGATACATATAACCTCTCAAGTGGGATAACAGCCTCTCCCACACAGTATTATCTAAGAGCTACGCTTAGTTTTGATGGGGTTTTCACTCTCTATCAACATCCAAAGAGCTCTTTTGGTAATGAAACTTGGACACCTCTATGGTCTCTACCAGATAATATTTGTACCAAAAGTCTTGTCACTACAGGTAGTGGAGTTTGTGGTTATAATAGCATCTGCTCCTTGAATGATTACAACAGGCCAGTTTGTGAATGCCCAAAAGGATATTCTCTACTTGATCCTAATGATCCATATGGCAGTTGTAAACCAGATTTCATACAAGGTTGTGAAGAAGATAAGCTTAGTCAAGGTAAAGATCTTTATGAGTTTGAGATGCTAATAAATACTGATTGGCCTTATTCTGATTATGTGCTTCAAAGGCCTTTTACTGAAGATAATTGCAAACAGTCTTGTATGGAAGATTGCATGTGTGCAGTTGCCATTTTCAGGTTAGGTGATAGTTGCTGGAAGAAGAAGTTACCACTTTCAAATGGAAGAGTGGACACAAGTTTAAATGGAGGTAAGGCTTTTCTTAAAGTGAGGAAAGAAAAATTCTCCATAGTTAGTCCTTCATTCATCACGAGACAGAACCAAGAAACTTTGAAGTTggtggggtttgggctttttgGTGGCTCTGCGTTTCTTAATCTCATATTCATTGGACTTGAAAAAGCTACCAATGGGTTCGAGGAAGAGTTAGGAAGGGGAGCTTTTGGTGTTGTTTATAAAGGAACCATAAACATGGGCTTATCTCACATTCATATTGCAGTCAAGAGGTTGAACAACTTTGTTTTGAAAGAGATCGAAAAGGAGTTCAAAAATGAAGTGAATGTGATTGGTCAGACCCATCATAAGAATCTGGTTCGTCTGCTAGGTTTTTGTGAGGAAGGATCAGAAAGGTTACTGGTATATGAGTACATGAGCAATGGCACATTGGCAAGCCTTCTTTTCAATGACTCAAAACCCAGTTGGAACCTAAGACAAAGAATTGCATTTGGCATTGCAAGAGGGCTTGTTTATTTACATGAAGATTGCAGCACCCAAATCATCCACTGTGACATAAAGCCTCAGAACATACTTCTTGATGACTACTTCAATGCAAGAATTTCTGACTTTGGATTGGCCAAGCTCTTGAACATCAATCAGAGCCGGACAAACACAGGCATaagaggaacaaaagggtaTGTTGCACTAGAATGGTTCAAGAATATGCCTATCACAACCAAAGTAGATGTGTATAGCTTTGGTGTATTGCTGCTTGAGATTATTTGCTGCAGGAGAAGTGTGGATATGGAGGCAGAGAATGAGGAGAAAGCAATCTTAACAGATTGGGCATATGATTGCTACACAGAAGGTTGTGTAGAAGCTTTGGTCGAAGAAGATGAGGAGGCGTTGGAAGACAAGAAGAAGCTTGAGAAGTTAGTAACGATTGCCATTTGGTGTGTTCAAGAGGATCCAACTCAGAGACCCACCATGAGAAAGGTGGTAGAGATGCTTGCAGGTGTTTCTGAATGCAACAtacccttttgttcctcttATGCCTGTGTTTGTCCGGCTCTGATTGATGTTCAAGAGCTTGGCCAATCCAAAGTCAGAAATTCTTGCATTGAAGCAGTCATCAAGAAGTATGTTCTGAGGCTTTATGTCACAGTGGATGATCTGGGTGCTGCAATCTTCATGATGCATGAAGGTCTCCCAGAGAGTAGTATTGGTCCTATCTTGAAGAAGAACGTTTCCAGAATCTTGCAAGGAAGCATGAGCAACAGTAGAAGTAAGGATGCTTGTGTTCCACAGAGCACTCCCATTAGGATAAGTAAGAAGCAGCCCTCTTTCAGCAGTAAGCTCTACCTTTGA 2598 0.3957 MAVSMNNMLLCLLLLCLPTVCVYAQTKSQLSVGDSLYAGSGNSSGTWVVSPSGDFALGFQPLEGNNGVFLLSIWYENIPEKTIVWYANGDNPAPKGSKVELTAGGLVLTFPDGRELQKPETLSGSVTQGVLNDSGNFILQDKTSTTAWDTFKDPRDTVLPSQFLGNGEKLSSRRSETNFTKGRFQLVMQDDGNLVMHSINLPSEYANQNYYESGIIESNSSSVGLQLVTFMLRDSNDTYNLSSGITASPTQYYLRATLSFDGVFTLYQHPKSSFGNETWTPLWSLPDNICTKSLVTTGSGVCGYNSICSLNDYNRPVCECPKGYSLLDPNDPYGSCKPDFIQGCEEDKLSQGKDLYEFEMLINTDWPYSDYVLQRPFTEDNCKQSCMEDCMCAVAIFRLGDSCWKKKLPLSNGRVDTSLNGGKAFLKVRKEKFSIVSPSFITRQNQETLKLVGFGLFGGSAFLNLIFIGLEKATNGFEEELGRGAFGVVYKGTINMGLSHIHIAVKRLNNFVLKEIEKEFKNEVNVIGQTHHKNLVRLLGFCEEGSERLLVYEYMSNGTLASLLFNDSKPSWNLRQRIAFGIARGLVYLHEDCSTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNINQSRTNTGIRGTKGYVALEWFKNMPITTKVDVYSFGVLLLEIICCRRSVDMEAENEEKAILTDWAYDCYTEGCVEALVEEDEEALEDKKKLEKLVTIAIWCVQEDPTQRPTMRKVVEMLAGVSECNIPFCSSYACVCPALIDVQELGQSKVRNSCIEAVIKKYVLRLYVTVDDLGAAIFMMHEGLPESSIGPILKKNVSRILQGSMSNSRSKDACVPQSTPIRISKKQPSFSSKLYL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0219 865 SMART serkin_6 475 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0219 865 SUPERFAMILY Protein kinase-like (PK-like) 466 747 IPR011009 -
Sto3g0219 865 PIRSF SRK 458 791 IPR024171 GO:0004674
Sto3g0219 865 PIRSF SRK 1 469 IPR024171 GO:0004674
Sto3g0219 865 Gene3D Phosphorylase Kinase; domain 1 444 554 - -
Sto3g0219 865 CDD STKc_IRAK 481 747 - -
Sto3g0219 865 Gene3D - 28 153 IPR036426 -
Sto3g0219 865 CDD PAN_AP_plant 350 428 - -
Sto3g0219 865 Gene3D - 155 296 - -
Sto3g0219 865 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 212 IPR036426 -
Sto3g0219 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Sto3g0219 865 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 469 762 - -
Sto3g0219 865 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 8 469 - -
Sto3g0219 865 Pfam D-mannose binding lectin 82 167 IPR001480 -
Sto3g0219 865 Pfam Protein tyrosine and serine/threonine kinase 477 747 IPR001245 GO:0004672|GO:0006468
Sto3g0219 865 ProSiteProfiles Protein kinase domain profile. 475 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0219 865 SMART blect_4 39 154 IPR001480 -
Sto3g0219 865 ProSiteProfiles Bulb-type lectin domain profile. 33 152 IPR001480 -
Sto3g0219 865 ProSitePatterns Protein kinases ATP-binding region signature. 481 514 IPR017441 GO:0005524
Sto3g0219 865 Gene3D Transferase(Phosphotransferase) domain 1 555 756 - -
Sto3g0219 865 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 469 - -
Sto3g0219 865 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 469 762 - -
Sto3g0219 865 Coils Coil 702 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0219 Sto-Chr3 1463020 1468965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0219 467 749 Receptor kinase-like Gene Family AT1G60800 42.907 1.21e-70 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto3g0219 PK_Tyr_Ser-Thr 9.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0219 - - gmx:100795822 984.941