LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g0218	ATGGATCACAATCCCCTTTTCCTCTGCCTAATCATCCTGTGTCTACCATCTGTTTGTGTTTTTGCCCAAACCAAAAGTAATATTACTGTGGGTGAGTCTTTCACCGCAGGAGATGGCAATTCCACGTGGGTCATTTCACCTTCTGGGGATTTCGCCTTTGGCTTTCAACCACTTGCAGGAAATAATGATCAGTTCTTGCTTTCCATCTGGTATGCCAAAATTCCAAACACAACCATCGTTTGGTATGCCAATGGAGACAATCCTGCTCCAAAGGGCTCAAAAGTACAGCTTACTGCTGCACAAGGGCTTGTGCTTACTTCTTCTAATGGTGGGGATCTGTGGAAACCTGATAGTATTGGTGGTGGTACTGTTGCTCTTGGAGCCTTGAATGACTTGGGTAACTTTGTCCTTGAAGATAGCACCTCTAAATCTTTATGGGAGACCTTCAAGAAACCTAGAGATACCATGTTGCCCTCACAAATTCTGGAAAAAGCAGGAAAGCTTTCTTCTCGACGGTCAGAGGCAGATTTCTCCCAAGGAAGGTTCCAGCTCCTTCTTCAGGATGATGGTAATCTTGTGATGCATTCTATAAACTTGCCATCTGAGTATGCTAATGAAAATTATTATGAAAGTGGTACTGTTGAGTCCAATACATCAAGTCCCGGCTTTCAACTGGTCTTCAACAAATCAGGAGCCTTGTATATTTTGAGAGAGAACAATGAAACATACAGTCTCGGGATAAATGTTTCTTCCTCTCAATTTTATCTTCGAGCTGTTCTTAATTTTGACGGAGTTTTCACTCTCTATCAACATCCAAAAACTTCCTTTGGCAATGAAACTTGGACCTCCCTCTGGTCTCACCCAGATGATATATGTACAGCTACCCTTGTCTCAACAGATAGTGGCGTTTGTGGATATAATAGCATATGCTATTTAGGCGATGATAGTAGGCCAACTTGTCAATGCCCAACTGGCTATTCTCTACTTGATCCTAAAGACCCGTATGGTAGCTGTAAACCAGATTTCATACAAGGCTGCAAAGAAGATGAGCTTAGTGGGGGGAATGATCTGTATGAATTAGAGGTGTTAACAAATGTTGATTGGCCTCTTGCTGATTCTGTGCTTCAGAGGCCTTTTACTGAACAACAGTGCCGTCAGGCTTGTATGGAAGATTGCATGTGTTCAGTAGCAATTTTCAGGTTAGGTGACAGTTGCTGGAAAAAGAAGTGGCCACTTTCAAATGGCAGATTTGACACAAGTCTAGATGGTGGTAAGGCTTTAATCAAAGTGAGGAAAGACAATTCCACCCTTTTTGGTCCTCCTGCTCCTCCAATCATCAAGAGAAAGAATCAAGACACTCTGGTTTTGGTGGGCTCTGTGCTTCTGGGTGGCTCTGCGTTAATTAATCTCATATTCTTTTCATTCATTTATCAGCTCCTGAAAAAGCTTAAAAATGTAAACCAAAGTGATAGTGATGTTAAGACCAATCTGCGTTGTTTTACTTACAAGGAGCTTGAAGAAGCTACAAATGGGTTCAAAGAAGAGTTAGGAAGGGGAGCTTTTGGTGTTGTTTATAAAGGAACCATAAACATGGGCTTATCTCCTATTCATATTGCAGTCAAGAGGTTGAACAACTTTGTTTTGAAAGAGATTGAAAAGGAGTTCAAAAATGAAGTGAAAGTGATTTCTCAGACCTATCATAAGAATCTGGTTCGTCTGCTAGGTTTTTGTGAGGAAGGAGCAGAAAAGTTGCTAGTATATGAGTACATGAGCAATGGCACATTGGCAAGCCTTCTTTTCAATGACGTGAAACCCAGTTGGAACTTAAGACAGAGAATTGCATTTGAGATTGCAAGAGGACTTGTTTATTTACATGAAGATTGCAGCACCCAGATCATCCACTGTGACATAAAGCCTCAGAACATACTTCTTGATGACTGCTTCAATGCAAGAATTTCTGACTTTGGATTGGCCAAGCTCTTGAACATCAATCAGAGCCGGACAAACACAGGCATaagaggaacaaaagggtaTGTTGCACTAGAATGGTTCAAGAATATGCCTATCACAACCAAAGTAGATGTGTATAGCTTTGGTGTATTGCTGCTTGAGATTATTTGCTGCAGGAGAAGTGTGGATATGGAGGCAGAGAATGAGGAGAAAGCAATCTTAACAGATTGGGCATATGATTACTACACAGAAGGTTGTATAGAAGCTTTGGTGGAACAAGATGAAGAGGCATTAGAAGACAAGAAGAAGCTTGAGAAGTTAGTAATGATTGCCATTTGGTGTGTTCAAGAGGATCCAACTCTTAGACCCACCATGAGAAAGGTTGTTCAGATGCTTGAAGGTGTTTCTGAAGTGTTTTATCCACCTCCCGAGTCCCCCTAA	2391	0.4111	MDHNPLFLCLIILCLPSVCVFAQTKSNITVGESFTAGDGNSTWVISPSGDFAFGFQPLAGNNDQFLLSIWYAKIPNTTIVWYANGDNPAPKGSKVQLTAAQGLVLTSSNGGDLWKPDSIGGGTVALGALNDLGNFVLEDSTSKSLWETFKKPRDTMLPSQILEKAGKLSSRRSEADFSQGRFQLLLQDDGNLVMHSINLPSEYANENYYESGTVESNTSSPGFQLVFNKSGALYILRENNETYSLGINVSSSQFYLRAVLNFDGVFTLYQHPKTSFGNETWTSLWSHPDDICTATLVSTDSGVCGYNSICYLGDDSRPTCQCPTGYSLLDPKDPYGSCKPDFIQGCKEDELSGGNDLYELEVLTNVDWPLADSVLQRPFTEQQCRQACMEDCMCSVAIFRLGDSCWKKKWPLSNGRFDTSLDGGKALIKVRKDNSTLFGPPAPPIIKRKNQDTLVLVGSVLLGGSALINLIFFSFIYQLLKKLKNVNQSDSDVKTNLRCFTYKELEEATNGFKEELGRGAFGVVYKGTINMGLSPIHIAVKRLNNFVLKEIEKEFKNEVKVISQTYHKNLVRLLGFCEEGAEKLLVYEYMSNGTLASLLFNDVKPSWNLRQRIAFEIARGLVYLHEDCSTQIIHCDIKPQNILLDDCFNARISDFGLAKLLNINQSRTNTGIRGTKGYVALEWFKNMPITTKVDVYSFGVLLLEIICCRRSVDMEAENEEKAILTDWAYDYYTEGCIEALVEQDEEALEDKKKLEKLVMIAIWCVQEDPTLRPTMRKVVQMLEGVSEVFYPPPESP	796

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g0218	796	ProSitePatterns	Protein kinases ATP-binding region signature.	516	549	IPR017441	GO:0005524
	Sto3g0218	796	Pfam	Protein tyrosine and serine/threonine kinase	512	782	IPR001245	GO:0004672\|GO:0006468
	Sto3g0218	796	SMART	blect_4	33	152	IPR001480	-
	Sto3g0218	796	Gene3D	Transferase(Phosphotransferase) domain 1	590	789	-	-
	Sto3g0218	796	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1	8	792	-	-
	Sto3g0218	796	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	8	792	-	-
	Sto3g0218	796	Gene3D	-	152	278	IPR036426	-
	Sto3g0218	796	CDD	STKc_IRAK	516	784	-	-
	Sto3g0218	796	Coils	Coil	737	757	-	-
	Sto3g0218	796	ProSiteProfiles	Bulb-type lectin domain profile.	25	150	IPR001480	-
	Sto3g0218	796	Gene3D	Phosphorylase Kinase; domain 1	476	589	-	-
	Sto3g0218	796	SUPERFAMILY	alpha-D-mannose-specific plant lectins	65	213	IPR036426	-
	Sto3g0218	796	SUPERFAMILY	Protein kinase-like (PK-like)	494	783	IPR011009	-
	Sto3g0218	796	ProSiteProfiles	Protein kinase domain profile.	510	790	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto3g0218	796	PIRSF	SRK	2	796	IPR024171	GO:0004674
	Sto3g0218	796	Gene3D	-	20	150	IPR036426	-
	Sto3g0218	796	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	632	644	IPR008271	GO:0004672\|GO:0006468
	Sto3g0218	796	Pfam	D-mannose binding lectin	78	163	IPR001480	-
	Sto3g0218	796	SMART	serkin_6	510	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto3g0218	Sto-Chr3	1457980	1465170	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto3g0218	488	784	Receptor kinase-like Gene Family	AT1G60800	43.092	2.26e-75	253

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Sto3g0218		PK_Tyr_Ser-Thr	1.8e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g0218	-		-	gmx:100815462	1035.02