Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0203 TTGACAAGTAGTCGCCAGGATAAACCTTCCTCGTGGGTGTCGGAGAGGGTTTCATATGCTGATATAGTGAAGAATCTGGAAGGTGGTGTAGGGAGAAGGGATGATAACGGTTCTGAGGGTCGTAGTCGTAACGGTATAAGGGAGAGTTTGGCACcacaaaacaaatttaaaaagacTCTTAAGATACACTTGGATCCTAATGGGAGAAGGAGAGTGGAGTGGGTCTTAGAAAGAAGGGTTCAACAACCGAGAAGTCCTTTGAGGCTTGCATTAAGTAAAGGTCCTCCAGAAATTCATAAGTCTCAACAGCAACCAAAGAAGCGAGTTAATTGGGCTTTGCATGATACAACTCGAAAAAATGGAACCAAGAGGGCTAATGAATCACGTGTAGAGGAGTTGGGTCAGGTTAAGGCCCAAAGCTCTCTTAAGAAAGTAGTGAATGGTAGCGATGGAGGTCGAAATGAGGCTATTAGACCTTTGGCATTGACGTGGGTGGCCAAAGGGGTAGACAAGGTAAAGAAAGGGACAGAGGTGATGGGTAGTGTATTGGGACCTGTTTCTGGTGAAGGGAGTGAATATAATTCGAGTACTCATGCCTCATCAAAAGGAAAGGAGGTAATTCAGGAGGTGGATTTAGGCCCAAGTTGTTCTGGTACTAAGGGGGAGATGACAAGCCATTCTTTCTTTGACGCGGAGGCATTATCGTCAGATACTTCAGACACAGAAACTGTAGACGATGACTCTCTGATATCTCATTTTGAAAATGAAGAGGGGTTATTAATCGAGCAGTTAGAAAGAGAATTTATGGAAGagcaaaagcaacaaaataaggaGGCAGAAGTTCCTCTTGATGGTTTTGCTGTACTCTTTGGAGGGGAAGGTGAAGAGGCTACGCATGGTGGCAGCACAATGTCATACATTCTTCTGACTCTCAGCAGTTGGTTTATGGCTTTATCCTGGTTATTTGCTCCATATTTATTCAATCCATCTGGATTTGAGTGGCAAAAGGTAGTAGAGGACTTTAGAGATTGGACAAATTGGCTTCTTTACCGTGGTGGAATTGGAGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGATGAAGAACTGGCACATATTAGAAGTATTGGCTCAAGGATAGCAGAGACAATCCTGAGTCTAAGATTTTTCATCTTCCAATATGGTATTGTGTACAAGCTTCATTTGCAAGGAGATGATACTTCATTAACGGTTTATGGCCTGTCATGGATAGTGCTGGCTGTTCTTATAATTCTTTTCAAGGTGTTCTCATTTAGCCAGAAGATATCAGTTAACTTCCAGCTTTTGTTGCGCTTTATCCAAGGCCTCTCCTTCATGTTGGCGCTGGCTGGTTTAGTTGTTGCAGTCATATTTACCAAACTTTCTGTACCTGACATTTTTGCTTGTATCTTAGCATTTATTCCTACTGGATGGGGAATCCTTTCGATTGCTGCTGCCTGGAAGCCTGTGATGAAGAGGGTGGGACTATGGAAATCCATTCGATCAATTGCTCGTCTATATGATGCTGGCATGGGAATGCTTATCTTTATACCAATTGCGTTATTCTCATGGTTCCCGTTTGTATCCACATTCCAAACCCGTCTCATGTTTAACCAAGCTTTCAGCCGAGGCCTTGAAATTTCTCTCATTCTTGCAGGAAACAATCCCAATACCGGGCCTCAGATGATGAATCAGGTACAAATGATGAACCAGCCACAGGTAATTAATCAGTCTCAAATAATAGGTCAGTCTCAACCCTTGTCCCAGCCTCAAATGCTGATACACTCTCAAGCATTGAATCAGCAGCCTCAGACGCAGCCGCAACAGCAACCCCAACCCCAGATGAAACCTCCTCAGATTTTGATGAACCAGGCTAAGCCACCGATGATGAATCGGGGCTATAAGGTTTGGCCTCAGCAGCCCCCTATGGACCCTAACATGAAGTTTCAGAACCCCATGAAACCAAATTATCCGAACTCCAAGCTGGGACGTAGCAATTGGAAGGGGAAGAAGGTGACGGACAAGCGTAAGGACCCGAGAAGAATGGATAAATCTAATCCAAGTGGCTCGCTAAGTGTCCAAACCAACGATGTTGGGTACAAACCACCTACTCTGCACGAGTTACAGTCTCAGAATCGTTTAAAAGCCCGGAAATTCTATCCCAAGAAGAAATTTAATAACAGATTTGCTCCTTATGCCCCGAGAAACACAACATCGTTTCTTATTCGTGCTAAGAAGTCAGGAGGCATTGCTTCCCTTGTGTCACCTTGCCCAGTAACGCCATCCGTTCTTCCTACACCAATATTTTCTCCCTCTAGAGAGGTATTAGGGGATATGGCGAAGGAAGAGTGGGGTGTTGATGGATATGGGTCAATGAAGGGTTTGATAAGGCTTCGGTCACCAGGGCATGAAGCAGAGGTTCACGAGgacgaagaagatgaagaaggtgGCGCTGGGTCCAGTGATAGTGATGTGGAAGAACATGTGGAGGTGGAAAGAAGGTTGGACCATGATCTGAGTCGGTTTGAGATGATATATCCGAATTATGGAGTTGATTATAATAATGTCTTAGAGAATAGGGTAGATGATCAAGATTCTCATATAGCACAATTGGAGGAGGAGAATTTGACAATGAAAGAGCGACTTTTCCTAATGGAGAGGGAATTAGGTGATTTGAGAAGGAGGTTACAGTTTCTTGAGAGGCAAAACCAAATTGTGGAAGATGTCAACGAAGAAGTGGTGGAGAATGGCTCTGATAATGAAAGTGAGGGCGGATCGGATGCCCCAGTTGTAGGAACTGAGAAAAATGCAGAGATGGTTGATTATGTGCCACATGGGAGAAATGAAGACGGAGATGCTAATGGTAAGGTAAAAAATGATGGAGTATCTGGAGGTATAGGAGACGTTTATATGGAAGAGTTTATTCCGGATAATGTGATTGCCAATAAGAATGAGATCAATTGTGAAGTGAGGAATCAGTTTGTGTTCGATGAAGAGAAGGACAAACTCAAGGATGAAAAAGCAACCGAGGGATATATACCAGATGAAGTTGGAGTGAAAGAAAATGTCGTTGGAGATCAAAAAGGGAATGGTGAATTTGATGTAGTGGAGACAAAGAATGGATTAGAAGCCCAAGAAACAAACAATGAACGTGTACGAGATAATGTCCTTACTGAGAACGATGAATGCAAGGATGGGGTAGTTGGGACATGCTTGGGGACTATTAGAGATGAGGACTTGTCTGCCTCACATTAG 3273 0.4293 LTSSRQDKPSSWVSERVSYADIVKNLEGGVGRRDDNGSEGRSRNGIRESLAPQNKFKKTLKIHLDPNGRRRVEWVLERRVQQPRSPLRLALSKGPPEIHKSQQQPKKRVNWALHDTTRKNGTKRANESRVEELGQVKAQSSLKKVVNGSDGGRNEAIRPLALTWVAKGVDKVKKGTEVMGSVLGPVSGEGSEYNSSTHASSKGKEVIQEVDLGPSCSGTKGEMTSHSFFDAEALSSDTSDTETVDDDSLISHFENEEGLLIEQLEREFMEEQKQQNKEAEVPLDGFAVLFGGEGEEATHGGSTMSYILLTLSSWFMALSWLFAPYLFNPSGFEWQKVVEDFRDWTNWLLYRGGIGVKGEESWEAWWDEELAHIRSIGSRIAETILSLRFFIFQYGIVYKLHLQGDDTSLTVYGLSWIVLAVLIILFKVFSFSQKISVNFQLLLRFIQGLSFMLALAGLVVAVIFTKLSVPDIFACILAFIPTGWGILSIAAAWKPVMKRVGLWKSIRSIARLYDAGMGMLIFIPIALFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGPQMMNQVQMMNQPQVINQSQIIGQSQPLSQPQMLIHSQALNQQPQTQPQQQPQPQMKPPQILMNQAKPPMMNRGYKVWPQQPPMDPNMKFQNPMKPNYPNSKLGRSNWKGKKVTDKRKDPRRMDKSNPSGSLSVQTNDVGYKPPTLHELQSQNRLKARKFYPKKKFNNRFAPYAPRNTTSFLIRAKKSGGIASLVSPCPVTPSVLPTPIFSPSREVLGDMAKEEWGVDGYGSMKGLIRLRSPGHEAEVHEDEEDEEGGAGSSDSDVEEHVEVERRLDHDLSRFEMIYPNYGVDYNNVLENRVDDQDSHIAQLEEENLTMKERLFLMERELGDLRRRLQFLERQNQIVEDVNEEVVENGSDNESEGGSDAPVVGTEKNAEMVDYVPHGRNEDGDANGKVKNDGVSGGIGDVYMEEFIPDNVIANKNEINCEVRNQFVFDEEKDKLKDEKATEGYIPDEVGVKENVVGDQKGNGEFDVVETKNGLEAQETNNERVRDNVLTENDECKDGVVGTCLGTIRDEDLSASH 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0203 1090 PANTHER - 605 1002 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 808 834 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 673 690 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 606 626 - -
Sto3g0203 1090 Pfam 1,3-beta-glucan synthase component 302 379 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Sto3g0203 1090 MobiDBLite consensus disorder prediction 645 710 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 26 47 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 920 939 - -
Sto3g0203 1090 Coils Coil 860 922 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 606 625 - -
Sto3g0203 1090 PANTHER OS02G0832600 PROTEIN 605 1002 - -
Sto3g0203 1090 Coils Coil 261 281 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 27 42 - -
Sto3g0203 1090 MobiDBLite consensus disorder prediction 691 710 - -
Sto3g0203 1090 Coils Coil 1048 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0203 Sto-Chr3 1302440 1313604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0203 301 565 Cell Wall Biosynthesis AT3G07160 80.000 8.47e-134 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0203 K11000 - vra:106772413 623.624