LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto3g0196	ATGCATCTCAATCGTCTCTGCGTCATTTTACCTGCAGATTCTGATGAAACTGAGCATCACCCCCCACCACCACAAGTCACACACGAGGAAACCAACATCAAACGCTCCCATCGTGCTTGTGGGGTTCATGTTCTTGCTTTCCTTCGTGATTCTCTGAGCAAACTATATGGCGCCAACTGTTTGACGTTTTGCCGCAATGAAGCGGGAAAAGGGAAAAAACAAGGGTCAGGTGTGTTGTTTCATGACATGGATGGTGTACAATTCTCTGCCAAGTTTTGTGGGGACAACCCCAGGATTTTCAGCTTCTCTGAGCTTTTCATAGGCTCTAATGGTTTCAGTGAGGATCATGTTCTGGGGAGTGGAGGTTTTGGGAAAGTGTATAAGGCTGTTTTGCCTAGTGATGGAACGGTGGTTGCTGTGAAATGCTGCTTAGAAGAGAAAGGGCAACAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCTGTGGCTCATCTTCGCCACAAGAATCTTGTCAGGTTAAGGGGTTGGTGTGTTCATGAAGATCAGTTGTATCTGGTTTATGATTACATGCCTAACCTTAGCCTTGACCGGATTCTCTTTCGCCGGCCGGAGAATTTGAATGCTGCTGAGTCGCTTGGATGGGGAAGGCGTGGGAAAATTGTGAAGGGTTTGGCAGCTGCATTGTATTATCTTCATGAGCAGTTGGATACTCAGATCATTCACAGGGATGTGAAAACCAGTAATGTGATGCTTGATTCACAGTATAATGCTCGCTTGGGTGACTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATcaacaagcaaagaaaacaTCAACCAAAATAGACCCTTTCAGATTGGCAGAGACTACAAGAATTGGAGGTACAATTGGGTATTTGCCACCTGAAAGCTTCCAGAAAAGAAGCATTGCTACTTCCAAATCTGATGTGTTCAGCTTTGGTGTAGTTGTTTTGGAAGTGGCATCTGGAAGGAGAGCTATTGACCTCACATACCCAGATGAGCAGATCATTTTGCTTGACTTCATCAGAAGGCTATCTGATGAGGGAAAGCTCCTAGAAGCTGGTGATTCAAGGATACCAGATGGTTCCTACAAGCTTTTTGAGATGGAGCACTTGCTTCACATAGGCCTTCTCTGCACACTCCACGAGCCACAATCAAGGCCTAGCATGAAATGGATTGTAGAAGCACTTTCTGACGTTTCATCCCCATTACCAGCTCTTCCTTCTTTTCATTCCCACCCTCTATACATCACTTTATCTTCTCCATCTGAAACTAGTATTAGCAGCACAAATGCATCTAGCACTGCCACAGACAATAACTATGTCACTGCAAATGGGCAAACAATATTCATGACTGCTGATGACAGAAACAGTGAAATCAACTCCTCAAAGAGCATGCATCGGCACACATTTCCTGTGGTTGAAGCTCCAAGGGAAATATCATACAAGGAGCTTTTCCAAGCTACAGATAATTTCTCAGAGTCAAGGAAGGTAGCTGAGCTAGACTTTGGAACTGCCTACCATGGCATCCTAGAGGATCGTTACCATGTCATGGTGAAACGCCTTGGGATGAAGACATGCCCTGCATTACGTGCAAGGTTCTCGAATGAGCTGCGAAATCTAGCGAGGCTTCGCCACCGGAATTTAGTGCAGCTTCGAGGATGGTGTACCGAGCAAGGGGAGATGCTTGTTGTGTATGATTACTCAGCAACAAGGCTGCTAAGTCACCAGCTTCTCCATCATAACAATCACCTAAGTAGGACTTCCTCTGTCCTGCAATGGCATCATAGATACAATATCGTGAAATCACTTGCTTCTGCCGTTCTCTATCTTCATGAGGAATGGGAGGAACATGTAATTCACAGAAACATCACCTCTTCAGCTGTCATCATTGAACCAGATATGAACCCAAGACTCACCTGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGGCATCATGTAATCGAAAACACTAGCAAATCAGTTCGAGGGATTTTCGGCTACATGTCACCAGAATACATGGAATCTGGTGAAGCAACCTCTGCAGCTGATGTCTATAGTTTTGGTGTGGTGATGCTTGAAGTTGTCAGTGGACAATTGGCAGTCGATTTTCGGCAGCCTGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAAATAAGAAAGAGGCCACTGGAGGAGTTAGCAGACATGAGGCTCAATGGAGATTACAACTACAAAGAACTAATGAGAATGGTGAAGTTGGGAATTGCATGCACTCAATCTAATCCACAGTTAAGACCAAGCATGAGACAAATAGTATGCACCCTTGATGGCAATGACAGATTAATCATGGAAGAAAACCAGAAGGAGAGCAGGGAAGAATGGAATCAAAGCAATGCTCGCTCTCTGTCAATGATTAGAAGAATGCAAGCTCTAGGAATACAGTGA	2466	0.4448	MHLNRLCVILPADSDETEHHPPPPQVTHEETNIKRSHRACGVHVLAFLRDSLSKLYGANCLTFCRNEAGKGKKQGSGVLFHDMDGVQFSAKFCGDNPRIFSFSELFIGSNGFSEDHVLGSGGFGKVYKAVLPSDGTVVAVKCCLEEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPENLNAAESLGWGRRGKIVKGLAAALYYLHEQLDTQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYQQAKKTSTKIDPFRLAETTRIGGTIGYLPPESFQKRSIATSKSDVFSFGVVVLEVASGRRAIDLTYPDEQIILLDFIRRLSDEGKLLEAGDSRIPDGSYKLFEMEHLLHIGLLCTLHEPQSRPSMKWIVEALSDVSSPLPALPSFHSHPLYITLSSPSETSISSTNASSTATDNNYVTANGQTIFMTADDRNSEINSSKSMHRHTFPVVEAPREISYKELFQATDNFSESRKVAELDFGTAYHGILEDRYHVMVKRLGMKTCPALRARFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHQLLHHNNHLSRTSSVLQWHHRYNIVKSLASAVLYLHEEWEEHVIHRNITSSAVIIEPDMNPRLTCFALAEFLTRNEHGHHVIENTSKSVRGIFGYMSPEYMESGEATSAADVYSFGVVMLEVVSGQLAVDFRQPEVLLVKKVHEFEIRKRPLEELADMRLNGDYNYKELMRMVKLGIACTQSNPQLRPSMRQIVCTLDGNDRLIMEENQKESREEWNQSNARSLSMIRRMQALGIQ	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto3g0196	821	Gene3D	Phosphorylase Kinase; domain 1	86	189	-	-
	Sto3g0196	821	SUPERFAMILY	Protein kinase-like (PK-like)	96	438	IPR011009	-
	Sto3g0196	821	ProSiteProfiles	Protein kinase domain profile.	501	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto3g0196	821	Gene3D	Transferase(Phosphotransferase) domain 1	585	809	-	-
	Sto3g0196	821	Pfam	Protein kinase domain	113	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto3g0196	821	PANTHER	RECEPTOR LIKE PROTEIN KINASE S.2	1	820	-	-
	Sto3g0196	821	ProSiteProfiles	Protein kinase domain profile.	112	425	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto3g0196	821	PANTHER	-	1	820	-	-
	Sto3g0196	821	SMART	serkin_6	112	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto3g0196	821	SUPERFAMILY	Protein kinase-like (PK-like)	481	783	IPR011009	-
	Sto3g0196	821	CDD	STKc_IRAK	512	784	-	-
	Sto3g0196	821	Pfam	Protein tyrosine and serine/threonine kinase	505	781	IPR001245	GO:0004672\|GO:0006468
	Sto3g0196	821	Gene3D	Transferase(Phosphotransferase) domain 1	190	411	-	-
	Sto3g0196	821	Gene3D	Phosphorylase Kinase; domain 1	461	577	-	-
	Sto3g0196	821	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	239	251	IPR008271	GO:0004672\|GO:0006468
	Sto3g0196	821	ProSitePatterns	Protein kinases ATP-binding region signature.	118	141	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto3g0196	Sto-Chr3	1263139	1265634	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto3g0196	482	783	Receptor kinase-like Gene Family	AT5G55830	35.831	3.67e-50	186

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Sto3g0196		PK_Tyr_Ser-Thr	2.2e-29	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto3g0196	-		-	gmx:100796108	1187.56