Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0186 ATGTCGGAATCACATTTCATCACTCCAAGATTGGTTCTGAAGAAGGTTTTAGCCAAATCTCTTCAGCAAGGCAATGGAGCTGTTCTTAGAGTCATTCCAGGCGAGTGGGAGAGTTTGGATCCATTTGTGACATTATTTCACTtctcagTGACTGCACCTGAAGGATTTCCTGATCATCCACACAGAgGTTTTGAGAGTGTCACCTACATCctccagGGAGCTTTGAGGTATCAAGATTTTGCTGGACACAAGAGTACCGTAACAACTGGTGATTGGGTGACAGCGGGAAGAGGGATTGTTCACTCTGAAATGCCAGCAGAAGAAGGAACCCATACTGGAATCCAACTATGGATCAATTTACCCTCCAAACTTAAAATGATGGAACCAAGGTACAAAGAAGTGAAGAGGAAGGAGATACCAATTGTGAAGAAAGAAGGAGTAGAAATGAGAGTTTTGGCAGGAAAAGCAGGAGCAGTAGAATCACCATATTACTCACAAACTCCAGTGATGATGCTTGATGTCACAATGAAGCCCACATCGGAAATGCATCACACAATCCCACACTGCAACTGCTTTGTGTATGTGATTGAAGGGGAAGGGGTATTTGGGTCAGTGGATTGTGCACCAATAGAGGAGCACCACGTGGCGGTGTTGGGTGATGGAGAAGGGGTTAGCGTGTGGAACAAGTCAAAGGAGAAGGAATTGCGGTATTTGGTGATTGGAGGAGACGCCGTGAAGGAGAGTGTAACTGTAGGAGCAACTTTTGTGATGAATACTCAAACTCAGATTCAAGACACTTTGGAGGATTTTCGTCATTTTAAAAATGGCTTTGAGTTGGCCAAATTTTGGAAATCACATTACTAA 864 0.4306 MSESHFITPRLVLKKVLAKSLQQGNGAVLRVIPGEWESLDPFVTLFHFSVTAPEGFPDHPHRGFESVTYILQGALRYQDFAGHKSTVTTGDWVTAGRGIVHSEMPAEEGTHTGIQLWINLPSKLKMMEPRYKEVKRKEIPIVKKEGVEMRVLAGKAGAVESPYYSQTPVMMLDVTMKPTSEMHHTIPHCNCFVYVIEGEGVFGSVDCAPIEEHHVAVLGDGEGVSVWNKSKEKELRYLVIGGDAVKESVTVGATFVMNTQTQIQDTLEDFRHFKNGFELAKFWKSHY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0186 287 CDD cupin_pirin_C 168 242 - -
Sto3g0186 287 Pfam Pirin 36 118 IPR003829 -
Sto3g0186 287 PANTHER PIRIN-LIKE PROTEIN 4 286 - -
Sto3g0186 287 CDD cupin_pirin_N 28 121 - -
Sto3g0186 287 PIRSF Pirin 8 284 IPR012093 -
Sto3g0186 287 PANTHER PIRIN-RELATED 4 286 IPR012093 -
Sto3g0186 287 Gene3D Jelly Rolls 28 271 IPR014710 -
Sto3g0186 287 SUPERFAMILY RmlC-like cupins 35 284 IPR011051 -
Sto3g0186 287 Pfam Pirin C-terminal cupin domain 171 275 IPR008778 -
Sto3g0186 287 Gene3D Jelly Rolls 140 245 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0186 Sto-Chr3 1163218 1164666 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0186 9 281 Calmodulin-binding Proteins AT3G59220 51.971 4.25e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0186 K06911 - vvi:100254895 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0186 3 1163218 1164666 Sto3g0186 3 1163218 1164666 ECH