Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0184 ATGAGAGCTTTTACATATCGCTTTTCAATTTCTTCACTGTTCAATCGAAGATCCTTCTCTTCTATTTCTTCAATTTATACCATGTCCGAATCTTCCCATCAATCCTCCGAAACCCCCAGATTGGTTCTCAAGAAGGTTTTGGCCAAATCTCAACACGAAGGCGATGGCGCTGTTGTCAGAAGAGGCATTGGAAGAACCGAGTTGAAGAGTTTGGATCCTTTTCTCCTGCTGGATCACTTCTCAGTGTCTCCACCTAGTGGTTTTCCTGACCATCCTCACAGAGGTTTTGAGACTGTCACATACATGCTGCAGGGATCCATAACCCATCAAGATTTTGCTGGCCACAAGGGCACAATAGGAACTGGTGATGTTCAGTGGATGACGGCAGGCAGAGGAATAATCCACTCTGAAATGCCTGGAGGAGAAGGAACCCACAAGGGACTGCAGCTATGGATCAATTTATCTTCCAAAGATAAGATgATTGAACCAAACTATCAAGAACTTCTTAAAGAGGACATACCAGCGGCAGAACAAGATGGGGTTGAAGTGAGAGTCATAGCAGGAGAAGCAATGGGAGTTCAATCACCTGTTTACACTAGAACACCCACCATGTTCCTTGACTTCTCTTTAAGCCCAGGAGCAGAAATGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTGTATGTCATTGAAGGAGAAGGTGTTTTTGGGTCTCTGAGTTCATCACCAGTTGGGGCTCACCATGTCCTGGTTTTGAGCCTAGGAGATGGCTTCACTGTGTGGAATAGGTCTTCAAAGCCTCTCAGATTTGCACTGATTGCAGGTCAGCCATTGAATGAACCAGTGGCTCAGTATGGACCCTTTGTGATGAACACACAGTCTGAGATTGAGAAGACTATAGAGGACTATCAATACTGCAAGAATGGGTTTGAGATGGGAAAATATTGGAGATCTCAATAG 963 0.4465 MRAFTYRFSISSLFNRRSFSSISSIYTMSESSHQSSETPRLVLKKVLAKSQHEGDGAVVRRGIGRTELKSLDPFLLLDHFSVSPPSGFPDHPHRGFETVTYMLQGSITHQDFAGHKGTIGTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELLKEDIPAAEQDGVEVRVIAGEAMGVQSPVYTRTPTMFLDFSLSPGAEMHQNIPESWNAFVYVIEGEGVFGSLSSSPVGAHHVLVLSLGDGFTVWNRSSKPLRFALIAGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGKYWRSQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0184 320 CDD cupin_pirin_N 57 154 - -
Sto3g0184 320 Gene3D Jelly Rolls 53 305 IPR014710 -
Sto3g0184 320 Pfam Pirin 60 152 IPR003829 -
Sto3g0184 320 SUPERFAMILY RmlC-like cupins 40 318 IPR011051 -
Sto3g0184 320 Pfam Pirin C-terminal cupin domain 205 310 IPR008778 -
Sto3g0184 320 PANTHER PIRIN-RELATED 28 320 IPR012093 -
Sto3g0184 320 PANTHER PIRIN-LIKE PROTEIN 28 320 - -
Sto3g0184 320 CDD cupin_pirin_C 202 278 - -
Sto3g0184 320 Gene3D Jelly Rolls 174 279 IPR014710 -
Sto3g0184 320 PIRSF Pirin 38 318 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0184 Sto-Chr3 1159003 1160715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0184 32 315 Calmodulin-binding Proteins AT3G59220 64.685 4.10e-136 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0184 K06911 - gmx:100775597 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0184 3 1159003 1160715 Sto3g0184 3 1159003 1160715 ECH