Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0182 ATGATGTATGTGAAGGTTATGACCGATGATCAATTGGAAACTCTTAGGCAGCAAATCGCTGTCTATACTACCATTTGTGAGCAGCTCGTTGAGATGCACAAAACACTCACTGCTCAGCAGGATCTTGCAGGAGTTAGGCTGGGAAATATATATTGTGACCCATTGATGACTTCTGCTGGCCACAAAATAACTTCCAGACAGAGGTGGACTCCAACTCCTGTGCAACTACAAATTCTTGAGCGGATATTCGACCAGGGGAATGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACAGCTGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCTCGATCAAAAAGAAAGCAGCAAAATGTGGCACCTAACAACACTGAATCAGAAGTAGAGACTGAAGCTGAGTCATCCAAAGATAAGAAGACAAAACCAGAGGAGCTTCAGTCCCAACATAGTGCATCTACCAGGGCGGAAGAATTATGCTTCCAGAACCATGAAGTATGCTCTGACTTGCACTACTTGAATCCTGAGTCCAGTAAACCAGAGTCCACGTTCCCTTCAGATGACAGTCTAAAACCTACTAGAAGTTTTGGCCAAATGTCTGTTTTTGATGGGATGCTGTCAAACTCAAGGGATGGCTATATCACTGGAAAGATGCAAGTACCAGGAAGCTACAATTTATACCAGCAAGCAGGAGATTACGACATGACAGGTTGA 747 0.4378 MMYVKVMTDDQLETLRQQIAVYTTICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNTESEVETEAESSKDKKTKPEELQSQHSASTRAEELCFQNHEVCSDLHYLNPESSKPESTFPSDDSLKPTRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQAGDYDMTG 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0182 248 Pfam Homeodomain 66 126 IPR001356 GO:0003677
Sto3g0182 248 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Sto3g0182 248 MobiDBLite consensus disorder prediction 184 203 - -
Sto3g0182 248 MobiDBLite consensus disorder prediction 124 166 - -
Sto3g0182 248 CDD homeodomain 66 128 IPR001356 GO:0003677
Sto3g0182 248 SMART HOX_1 64 131 IPR001356 GO:0003677
Sto3g0182 248 Gene3D - 68 132 - -
Sto3g0182 248 PANTHER - 1 247 - -
Sto3g0182 248 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 247 IPR044559 GO:0003700
Sto3g0182 248 SUPERFAMILY Homeodomain-like 64 129 IPR009057 -
Sto3g0182 248 MobiDBLite consensus disorder prediction 141 157 - -
Sto3g0182 248 MobiDBLite consensus disorder prediction 186 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0182 Sto-Chr3 1144288 1146672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0182 2 248 Wox Gene Family AT4G35550 56.015 1.18e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto3g0182 Homeodomain 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0182 - - qsu:112005537 401.364