Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0151 ATGGATGACGATTTTGAGTTCCCCACTGCGGCCAACGAAGACGAAGATATGGGGATTCCCGAGGATGATCCAGTTACCCCAATTCTCAATGTTGGAGAGGAGAAGGAGATTGGAAAGAGCGGGTTCAAGAAGAAGTTGGTTAAGGAAGGAGAAGGCTGGGAGACACCAAAAGCTGGAGATGAAGTTGAAGTTCATTATACCGGGACATTAATTGATGGAACCCAGTTCGATTCTAGCCGTGACAGGGGAACCCCATTTAAGTTCAAACTTGGACGTGGACACGTGATAAAGGGATGGGACGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCTATTTTCACAATACCCCCAGAGTTGGCCTATGGAGAGTCTGGATCTCCTCCAACTATTCCCCCAAATGCAACTCTACAGTTTGATGTGGAGTTGCTGTCTTGGACAAGTGTGAAGGACATATGCAAGGATGGTggtatattaaagaaaatagtCACCGAAGGAGAGAGTTGGGAAAATCCTAAGGATCTAGATGAAGTGTTTGTCAAGTATGAAGCGAGGCTTGAAGATGGGACACTCATTTCGAAATCTGATGGGGTGGAATTCACTGTTGAAGATGGCTATTTCTGTCCTGCTTTGGCTAAGGCTGTGAAAACAATGAAGAAAGGAGAGAAAGTCCTCTTGACCGTGAAGCCACAATGTGAAAGTTTATTGACATTTGATTTTGCAGATGCGTTTGGTGAGAATGGAAGACCAGCATCTGGAGATGAAGGTGCTGTACCTTGTAATGCTTTACTACAAATAAATCTCGAGTTGGTCTCTTGGAGGACAGTATCTGACATTACCAAGGATAGGAAAGTTCTCAAAAAGACTTTAAAGGAGGGGGAGAAGTATGAACGACCAAATGATGGATCTGTCGTTCAAGTGAAACTTATTGGCAAGCTGCAAGATGGGACTATTTTCATTAAGAAGGGTCATGATGACGAGCAGCCATTTGAGTTCAAAGTTGATGAAGAGCAAGTAATTGAAGGACTCGATAAAGCTGTGAAGAATATGAAGAAAGGGGAAATTGCACTGGTGACCGTACAACCTGAATATGCTTTTGGTGCCTCTGGGTCACCCCAAGAATTGGCTACCGTTCCTCCCAATTCAACTGTCTACTATGAGGTTGAGCTGCTTTCCTTTGAGAAGGAAAAGGAGACATGGGAATTGAACACACCGGAGAAGATTGAGGCAGctggaaagaaaaaggaagaagggaATGCATATTTCAAGGCTGGTAAATATGAAAGAGCATCAAAGAGATATAAAAAGGCCATGAGGTATATAGAGTTTGAGTCTAACTTCAATGATGAGGAGGAACAGCAGACCAAGGTATTGAAAATCTCATGCAACCTCAATAATGCTGCATGTATGTTGAAGCTTAAAGACTACAAGGAGGCAGTGAAATTATGCACAAAGGTATTAGAACTCGATAGTGGGAATGTTAAAGCTCTGTACCGAAGAGCACAAGCTTATATACAACTAGTGGACTTGGATCTTGCTGAAATGGACATTAAGAAAGCCCTCGAAATTGAGCCAGACAATAGGGACTTGAAAATGGAGTACAAAATTTTGAAGGAGAAAGTGAGAGAATACAACAAGAAGGATGCACAATTCTATGGCAGCATTTTTGCAAAAATGAATAAGCTGGAACAAGCTAGAACAGCTGCGGCAAAACAGGAGCACGTGCCAATGACTATTGACAGTAAAGCATAA 1752 0.415 MDDDFEFPTAANEDEDMGIPEDDPVTPILNVGEEKEIGKSGFKKKLVKEGEGWETPKAGDEVEVHYTGTLIDGTQFDSSRDRGTPFKFKLGRGHVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKKIVTEGESWENPKDLDEVFVKYEARLEDGTLISKSDGVEFTVEDGYFCPALAKAVKTMKKGEKVLLTVKPQCESLLTFDFADAFGENGRPASGDEGAVPCNALLQINLELVSWRTVSDITKDRKVLKKTLKEGEKYERPNDGSVVQVKLIGKLQDGTIFIKKGHDDEQPFEFKVDEEQVIEGLDKAVKNMKKGEIALVTVQPEYAFGASGSPQELATVPPNSTVYYEVELLSFEKEKETWELNTPEKIEAAGKKKEEGNAYFKAGKYERASKRYKKAMRYIEFESNFNDEEEQQTKVLKISCNLNNAACMLKLKDYKEAVKLCTKVLELDSGNVKALYRRAQAYIQLVDLDLAEMDIKKALEIEPDNRDLKMEYKILKEKVREYNKKDAQFYGSIFAKMNKLEQARTAAAKQEHVPMTIDSKA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0151 583 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 274 IPR001179 GO:0003755
Sto3g0151 583 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755
Sto3g0151 583 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 302 394 IPR001179 GO:0003755
Sto3g0151 583 SUPERFAMILY TPR-like 405 560 IPR011990 GO:0005515
Sto3g0151 583 PANTHER PEPTIDYLPROLYL ISOMERASE 394 570 - -
Sto3g0151 583 PANTHER PEPTIDYLPROLYL ISOMERASE 287 393 - -
Sto3g0151 583 PANTHER PEPTIDYLPROLYL ISOMERASE 16 281 - -
Sto3g0151 583 SMART tpr_5 411 444 IPR019734 GO:0005515
Sto3g0151 583 SMART tpr_5 494 527 IPR019734 GO:0005515
Sto3g0151 583 SMART tpr_5 460 493 IPR019734 GO:0005515
Sto3g0151 583 SUPERFAMILY FKBP-like 31 151 - -
Sto3g0151 583 ProSiteProfiles TPR repeat profile. 494 527 IPR019734 GO:0005515
Sto3g0151 583 SUPERFAMILY FKBP-like 150 275 - -
Sto3g0151 583 Gene3D - 150 274 IPR046357 GO:0003755
Sto3g0151 583 MobiDBLite consensus disorder prediction 1 26 - -
Sto3g0151 583 MobiDBLite consensus disorder prediction 1 21 - -
Sto3g0151 583 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 170 232 IPR001179 GO:0003755
Sto3g0151 583 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 297 391 IPR001179 GO:0003755
Sto3g0151 583 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 53 144 IPR001179 GO:0003755
Sto3g0151 583 Gene3D Tetratricopeptide repeat domain 397 554 IPR011990 GO:0005515
Sto3g0151 583 Gene3D - 34 149 IPR046357 GO:0003755
Sto3g0151 583 Pfam Tetratricopeptide repeat 472 527 - -
Sto3g0151 583 Coils Coil 527 547 - -
Sto3g0151 583 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 287 393 - -
Sto3g0151 583 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 16 281 - -
Sto3g0151 583 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 394 570 - -
Sto3g0151 583 Gene3D - 275 395 IPR046357 GO:0003755
Sto3g0151 583 SUPERFAMILY FKBP-like 277 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0151 Sto-Chr3 944868 948131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0151 1 583 Calmodulin-binding Proteins AT5G48570 70.101 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0151 K09571 - gmx:100810243 967.607