Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0147 ATGAGTTTTGGAATGGAAGATTTTAATGGTACTTGTGTTGATTTTGAAGGGCATGAGAGCCACGGAGTCTATTTGTGCCACAAATGTGGATGGCCCTTCCCCAATCCACATCCAAGTGCTAGACACAGGCGTGCTCATAAGAGGATCTGTGGAACCGTTGAAGGTTACAAATTGTTGGACTCAGAGGGACATGCCCATTCCAACGCTTCAGATGATTCTGACGATGATCACAAAATACCAAGTCCAAACTCCTTGGAAATAGATAAAAATGAGAAGGTCGGTGTTGGGATCggagaaaaaataattagatcAGAAGATGATGTTTTTTCAGATGCAGTTGCAGATTTTTCCGATAGTGCATTAAGTTCAGACTCAGCAATTAGTGTGGAGAGAGCAGACAGAAAGGATCCAAAATTTTTGAGCCTTCTGAGGACAAAGGTTTTGATGTTGTTTCTTCAATTTGCCTCTAATGGACTCGTAATAACTTATACAGCTGCAGGTGTGAGCAAGTTAATTGTTAAGTTGAGTGATGACTTCCAAATGCAAAGTCCTGAAGTTTCACAAAGTAAAGGGGCTGAGTTGCAAAATAAACAAGAGTTGCAAGTTCAACCATCAGGCTTTATTCGGGAACCATTGTCAACTTCGGATTTAGACTTGAGGACTGAAGCATCAACTGATGTGCATAGTGACGATTTCTTAGGTTTGCCAAGTAACTCTAATCTGAGCAATGGTAGCAAAGCTGAAGCCATCTCCGATGTAATTCCAGAAACTGGTGAAAATGTGACAGATTGTGTTTTGCCTCACGTTGCAGAGGAGACTAATTTGAAAAGTAAGGATGGGGCTGAATCAGAGAGAGAGGCAGTTGAAATTGTGGTCTCTTCTAATAATTTTGCTGGTGAAAGAAGTGAGGGATTTCCTAAAATAGAAGTTAGTGATAAGGTATCTTCAGATGATAAAGTTGCTGATGGAACTGCTAGGCAGAAGGAAGAGCTTAGTGTTGAGTTGTTTTCTGTGGCACCTCATGATAATCTTTCTCCTCTTGATGTAGATTCTGTTGTGAAAACAAGTGGTATTCAGGTAGAGTCTGAACACGTTTTACAGTTTGCTGATTCTAGTGATCTGATCAAGACTTCTCATGAAAAGGGAGAAGGAAATATTGATGTCAATGCACTTACTAATCCTCATTTAGCTCGTTCTCAGACTGTGTTTGAAGATTGTGAGTGTCCTGAAGAAGTGGTAGAACAAGATCCTTCAAGCCTACAACCATCTGAACCGTTGAAGCATCTTGAGGGTGACTTGAAGGAAATTGTGACTGAGGAGTCCCATTCCACTTTTGACCCAAACCAATTGattgaagaaaaagaagttCTCCCTCATGATATGCAAGTTCTGGATGATAGCATTAACCATGAGCCTAGTGTTGAAGTAATTGCTAAAGAGCAGGCTGAGAGATCAGTTCAAATTGAAGCCCTTGAGGATTCTTTCAAGTCCGAGATAAACAAGACTTGTATGGTTAACATTTCTGAAGAATCTGAATCTGATGGTGTTGGTAAAAGTTTACTGGAAGGTAGTGTCATCGTCTTGTCTGATAATTTTGAAGATTTTAAAGATTGCGAAGAAGTTGTTTCAGAAAATCCTACAAACCTACACTCATCTGAAGCATTGAAGGTTAATGAAGATGACTTGAAGGATAGTGTGAATGAGGAAAATCATTCCATTTTCAAGTCAAGCCAATTGAGTAAAGAAACTGAGGTTCTTTCTCCTGATATGCATGTTTTGGATGATAATATTAAGCAGGAGCGGGTCCACTATGAGCCAAAGGTTGAATGCACGTTTGCTAAAGAGCAAGTTAAAGAAGTGTCACCAATCATGCTGACAGTTAATGAAAAAAATCCATCCAATTTCAAGTCAAGTCAATTGAGTAAAGAAAGTGAGGTTCTTTCTCCAGATATGCATGTTTTGGATGATAACGATAAGCAGGAGCAGGTCCACTTTGACCTGAAGGTTGAAAACTCGCTTGCTGAAAAGCAAGCTGAAGTTTCTCCAATCATGCTGATTGATGAAAGTAATCAAAGATCAGATGAAGTTGGAGCCTCTGTGAATGCTTTGAACAGTGAGACGAGTGAGAGCCATGTAGTTTACTTTTCAGGAGAAAAGAAGTCCGATGATGTTTGTAAAACTTCACAAGAGAAAAGTTTTCCAGAAGATAGTGTCATGGCTTCCAAGGATGTATCCGTTTGTTCCTCAACCAGTCAAACTAGTGTAATTAGCATAGGCGGAATTGGTCATTGTGAGAAAAACAGAAATGAAATAGATGATATAGCTTTAGACAGCAAGAGCAGAGGAGGTAATGAGGAAAGTGACATTGGAATCAGGGTGGGAACTCTTCAACCTAGTGACCTCAAGCAATTGGAAGCCAAGACATCAAGTGATGTATTTAATAGTGATGATGCTGGTGAAAGAagtataattgaaaattttgatacaACTGATACTCAGGGTAGCGAAGTCTCTAATGTGAATGATACTTTATTGCTAAATTCTGGTGGTAGCCAATTTGAACCCCCTCTTGTTTCAGAGAATGTGATGGATGGGCATACTAGGAATTCAACAGGTATTGACTGCTCAAACAAAGATGCAGTATCAAGTACTAAGGAAGACATTAAGGgagatgaaataaataaaaacagcAAGGTACAGGAAGAAAATAACAGATTTGTTGGTACTTTTTCCAATTTACAACATGAAACACAAAATGCCGAACTATCACAGAATGCTGTAGAAAATCATGCAAGGGAGGTTTCCTCTCATTCTCCATTGGATACTGAGCCGCAATATGCTCAATCTGCTCATGCTGGAGAAGATAATCCATCTGTTGAAACTAATGGGGAAGCTTCGGCAACTAGGGTCATGGTTGCTCAAGATCGAAGCATCAATAACTTGGCTAAATTAGGTTCATCTGGAATTGATGCTTCAATTGATTCTAGTAGCCGCTGTGACAGTTTGGAAGGCAACTGGGGCTCTGTTTCAGTTCTCTCTGTCCTATCTGATGCACCGGCTGTAATTGATGGTGAAGCTCTTCCATCAACAGAATCAGGGAAATCCAACTTGAACAGTTCAAAAGCTGCGCCTGAGGAACAACGCTCTGAAAAATCTGACATGTTTGAACCACCATCATTCATGACATTGGTTGAACCTGGACATGTGGTTGATCCAAAAGCTGCTGCTGCTTCAGAAGTGCAGAAGGGACATAACCCACAACCAAATCCTACCTCTTTGCAGGCTGGTTGGTTTCCGACCATAACTCAAGTTGTTAATGATTCtcaaggaaggaagaagaatgaAGAAATTATAGCCAAGGTGACAAACTGGAGCAACAATAAACAACACACACCTCTGAAGAGCCTCTTGGGCGAGGCTGCCAATAGTGGCAACAAGCCGAAGTCTCCAAAGTCGGAAGAAAAACAAGCTAGTCCAAAAAATGGTAAAGTACCTAAAGATAATGGTTTGGGATTGACAACTGTTAACTCCATTCTGGGTCCTGAATCGCCTGCAGCGCCTACAGCTCAGGCTGCCATGAAAGGAGATGCTGGAAAAGAATGGAACTCCCCAGCAAGATATCCTGCAGATATCaagagagaaaagaggaaagTCAAGAGTAGACCTTATTGGATACAGTTTGTATGCTGCTCTTCTGTGGATCCTCAGTGA 3711 0.3964 MSFGMEDFNGTCVDFEGHESHGVYLCHKCGWPFPNPHPSARHRRAHKRICGTVEGYKLLDSEGHAHSNASDDSDDDHKIPSPNSLEIDKNEKVGVGIGEKIIRSEDDVFSDAVADFSDSALSSDSAISVERADRKDPKFLSLLRTKVLMLFLQFASNGLVITYTAAGVSKLIVKLSDDFQMQSPEVSQSKGAELQNKQELQVQPSGFIREPLSTSDLDLRTEASTDVHSDDFLGLPSNSNLSNGSKAEAISDVIPETGENVTDCVLPHVAEETNLKSKDGAESEREAVEIVVSSNNFAGERSEGFPKIEVSDKVSSDDKVADGTARQKEELSVELFSVAPHDNLSPLDVDSVVKTSGIQVESEHVLQFADSSDLIKTSHEKGEGNIDVNALTNPHLARSQTVFEDCECPEEVVEQDPSSLQPSEPLKHLEGDLKEIVTEESHSTFDPNQLIEEKEVLPHDMQVLDDSINHEPSVEVIAKEQAERSVQIEALEDSFKSEINKTCMVNISEESESDGVGKSLLEGSVIVLSDNFEDFKDCEEVVSENPTNLHSSEALKVNEDDLKDSVNEENHSIFKSSQLSKETEVLSPDMHVLDDNIKQERVHYEPKVECTFAKEQVKEVSPIMLTVNEKNPSNFKSSQLSKESEVLSPDMHVLDDNDKQEQVHFDLKVENSLAEKQAEVSPIMLIDESNQRSDEVGASVNALNSETSESHVVYFSGEKKSDDVCKTSQEKSFPEDSVMASKDVSVCSSTSQTSVISIGGIGHCEKNRNEIDDIALDSKSRGGNEESDIGIRVGTLQPSDLKQLEAKTSSDVFNSDDAGERSIIENFDTTDTQGSEVSNVNDTLLLNSGGSQFEPPLVSENVMDGHTRNSTGIDCSNKDAVSSTKEDIKGDEINKNSKVQEENNRFVGTFSNLQHETQNAELSQNAVENHAREVSSHSPLDTEPQYAQSAHAGEDNPSVETNGEASATRVMVAQDRSINNLAKLGSSGIDASIDSSSRCDSLEGNWGSVSVLSVLSDAPAVIDGEALPSTESGKSNLNSSKAAPEEQRSEKSDMFEPPSFMTLVEPGHVVDPKAAAASEVQKGHNPQPNPTSLQAGWFPTITQVVNDSQGRKKNEEIIAKVTNWSNNKQHTPLKSLLGEAANSGNKPKSPKSEEKQASPKNGKVPKDNGLGLTTVNSILGPESPAAPTAQAAMKGDAGKEWNSPARYPADIKREKRKVKSRPYWIQFVCCSSVDPQ 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0147 1236 MobiDBLite consensus disorder prediction 63 86 - -
Sto3g0147 1236 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 1138 1208 - -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 868 889 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 17 522 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 532 614 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 627 1233 - -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 1025 1060 - -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 1029 1043 - -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 1075 1095 - -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 927 962 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 17 522 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 532 614 - -
Sto3g0147 1236 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 627 1233 - -
Sto3g0147 1236 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 46 IPR013087 -
Sto3g0147 1236 MobiDBLite consensus disorder prediction 63 85 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto3g0147 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0147 - - gmx:102665569 710.679