Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0141 ATGGGTCAGCTGAAACTGAAAACCCTAGTTTCTTTCTCTGTACTCTTCGTACTCTCTCTACTCTCCTCCGCCATTGCCGACGATGGAGCTTTCATGTCCAAGCTTGCCAAAGCTCTCTCTAATCCCTCTGATTGGTCTGATAAGACTCCTTTCTGCAACTGGAGCGGCCTCAAATGTGACAGTTCTGGCCGCGTCACCTCCATTAGCCTTGCTTCTAAATCTCTTTCCGGTACTCTCCCTTCTGATCTCAACTCTCTTTCTCAgctcacctctctctctcttcagaACAATGCTCTTTCTGGCGCTTTGCCGTCTTTGGCAAATCTCTCTTTGCTTCAGACCGTCTACCTTGACCAGAATAATTTCACCTCCATACCTCCTGGTTGCTTCAAAGGCCTCACCAGCTTGCAGATGCTCAGCTTGACCGACAACATCAACCTTCAACCCTGGACTTTCCCTACCGATTTGATTGATTCTTCGAATCTGGGCACTCTTGAGCTTGGAAATGCTAATGTTGTAGGTTCTTTGCCCAATATATTCGATTCCTTCCCGAGCTTGCAGAGTGTTCGTCTCTCTTACAACAACCTCACTGGTGGGTTGCCTGCCACGTTTGGTGGATCTGGAATTGCCAACTTATGGCTTAACAATCAGCTTAATGGATTATCGGGTACAATCGACGTGTTATCATCGATGGAGCAGTTGTCTCAGGTTTGGCTTCATAAGAACCAGTTCACGGGTCCCATTCCCGACTTGTCCAAGTGCAAGAATTTGTTTGATTTGCAGCTTCGGGACAACGAATTAACTGGTGTAGTCCCACCTTCTCTCATGGCTCTCTCGAGCTTGAAGAATGTTTCTCTGGACAACAATGAACTGCAGGGGCCTGTGCCCGAGTTTGATACTGGCGTGATGGCTACTTTTGATGGGATCAAGAGCTTTTGTAGAACTACTAAGGGGCCTTGCGATGCGCGGGTGACAATTTTGCTTGAGATTGCTGCATCATTTGGGTATCCAATTAAATTGGCGGATTCATGGCAGGGTAATGACCCATGTGTAGGTTGGAGTTTCATTCTGTGTACGGGGGGAAAGATTACCACGGTTAATATGGCGAAGCAGAATTTCCAGGGAACAATTTCACCTGCATTTGGGAATCTAACGgatttaaaaaacatatatcTGAATGGTAATAATTTGACTGGTTCAATACCTGTGAGTTTGACAACTTTGCCCCAACTTTTGGTTCTTGATGTATCTAACAACAATCTTACTGGAGCGATTCCTAAATTCTCATCAACTGTGAAGCTGACAACTACTGGTAATCTCTTGCTTGGGAAAACTCCCTCCTCCGGAAGTGGAGGAAATGGAAGTAGCCCTGCCGGCGGTTCTGATGATATTACACCTGTTGGAAGTCCATCCGGAAAGGGAAATGGAACTTCATTATCACCTGGATGGATTGCAGGTATTGTCATTATTGCTCTATTTTTTGTGGCTGTGGTATTGTTTGTCTCTTGCAAGTGTTATGCTAAAAATCGTCATCAGAAATTTGGAAGGGTTAATAATCCTGAAAATGGAAAGGGAGATGTTAAAATTGATGTATTGAATGTTTCCAATGGATATGCTGGAGTCCCAAGCGAGTTACAAAGCCAGAGCAGTGGTGATCGTAGTGACCTTCATGTTTTTGAAGGTGGCAATGCTACAATTTCAATTCAAGTACTTCGCCAAGTAACAAATAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTACAAAGGGGAACTGCATGATGGAACAAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAATGGGAAGCAAAGGACTGAATGAGTTCCAAGCAGAGATTGCTGTCCTTAGTAAAGTCAGGCATAGACATTTGGTTGCTCTTTTAGGATATTGCATTAATGGCAATGAAAGGCTCTTGGTTTATGAGTATATGCCTCAGGGGACGCTTACACAACATCTGTTTGAATGGCATGAGAATGGGTGTGCTCCTCTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTAGCACGAGGAGTCGAGTACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGAGACTTAAAACCGTCAAACATACTTCTAGGTGACGACATGAGAGCAAAAGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGGAAATATTCTGTTGAAACACGATTGGCTGGAACTTTTGGGTATCTTGCACCTGAGTATGCAGCTACTGGAAGAGTGACAACTAAAGTAGATGTGTATGCATTTGGCGTTGTTTTGATGGAACTGATCACTGGTAGAAGGGCATTGGATGACACTGTCCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGTAGGGTTCTAATTAACAAGGAGAACATCCCAAAGGCTATTGATCAGACCCTTGACCCCGACGAGGAGACAATGGAGAGCATATATAAAGTTGCTGAGCTTGCTGGGCACTGCACTGCTCGCGAGCCATACCAAAGGCCAGATATGGGCCATGCAGTGAATGTGTTGGTTCCACTTGTAGAGCAGTGGAAACCTACAAgccatgaagaagaagagagttatGGCATAGACCTCCATATGAGCCTGCCTCAAGCTCTGCAAAGATGGCAAGCAAATGAAGGCACTTCAGCAATGTTTAATGACATATCCCTCTCACAAACGCAATCAAGCATTCCCTCAAAACCTTCAGGATTTGCAGACTCTTTTAATTCAATGGATTGCAGgtaa 2781 0.4355 MGQLKLKTLVSFSVLFVLSLLSSAIADDGAFMSKLAKALSNPSDWSDKTPFCNWSGLKCDSSGRVTSISLASKSLSGTLPSDLNSLSQLTSLSLQNNALSGALPSLANLSLLQTVYLDQNNFTSIPPGCFKGLTSLQMLSLTDNINLQPWTFPTDLIDSSNLGTLELGNANVVGSLPNIFDSFPSLQSVRLSYNNLTGGLPATFGGSGIANLWLNNQLNGLSGTIDVLSSMEQLSQVWLHKNQFTGPIPDLSKCKNLFDLQLRDNELTGVVPPSLMALSSLKNVSLDNNELQGPVPEFDTGVMATFDGIKSFCRTTKGPCDARVTILLEIAASFGYPIKLADSWQGNDPCVGWSFILCTGGKITTVNMAKQNFQGTISPAFGNLTDLKNIYLNGNNLTGSIPVSLTTLPQLLVLDVSNNNLTGAIPKFSSTVKLTTTGNLLLGKTPSSGSGGNGSSPAGGSDDITPVGSPSGKGNGTSLSPGWIAGIVIIALFFVAVVLFVSCKCYAKNRHQKFGRVNNPENGKGDVKIDVLNVSNGYAGVPSELQSQSSGDRSDLHVFEGGNATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWHENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEESYGIDLHMSLPQALQRWQANEGTSAMFNDISLSQTQSSIPSKPSGFADSFNSMDCR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0141 926 Gene3D Ribonuclease Inhibitor 321 445 IPR032675 -
Sto3g0141 926 SMART LRR_typ_2 183 206 IPR003591 -
Sto3g0141 926 SMART LRR_typ_2 408 430 IPR003591 -
Sto3g0141 926 SMART LRR_typ_2 86 108 IPR003591 -
Sto3g0141 926 SMART LRR_typ_2 109 132 IPR003591 -
Sto3g0141 926 SUPERFAMILY L domain-like 40 435 - -
Sto3g0141 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Sto3g0141 926 CDD STKc_IRAK 584 857 - -
Sto3g0141 926 Gene3D Ribonuclease Inhibitor 28 316 IPR032675 -
Sto3g0141 926 Gene3D Transferase(Phosphotransferase) domain 1 656 879 - -
Sto3g0141 926 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0141 926 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 12 926 - -
Sto3g0141 926 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0141 926 SUPERFAMILY Protein kinase-like (PK-like) 554 854 IPR011009 -
Sto3g0141 926 Pfam Protein tyrosine and serine/threonine kinase 581 852 IPR001245 GO:0004672|GO:0006468
Sto3g0141 926 MobiDBLite consensus disorder prediction 443 475 - -
Sto3g0141 926 Pfam Leucine rich repeat 112 147 IPR001611 GO:0005515
Sto3g0141 926 Gene3D Phosphorylase Kinase; domain 1 541 655 - -
Sto3g0141 926 Pfam Leucine rich repeat N-terminal domain 325 358 IPR013210 -
Sto3g0141 926 Pfam Leucine rich repeat N-terminal domain 33 60 IPR013210 -
Sto3g0141 926 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Sto3g0141 926 MobiDBLite consensus disorder prediction 904 926 - -
Sto3g0141 926 PANTHER OSJNBA0070M12.3 PROTEIN 12 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0141 Sto-Chr3 869781 873282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0141 65 854 Receptor kinase-like Gene Family AT5G07280 32.321 8.39e-94 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Sto3g0141 PK_Tyr_Ser-Thr 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0141 - - gmx:100781851 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0141 3 869781 873282 Sto3g0141 3 869781 873282 ECH