Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0109 ATGACAGGAAGCGATTGTCGCTTCTTCTACCTTCCCtctccaaaaccaaaacccttatCTGTCACTCACAAATCCCTCAATTTCCCCACTCGAACCGCCGCTTTCGCTTCCTTCCGAGTTAAATCCGCCATTAACGTCGCTGAGGCTCCCAAGTTGAGCTTCTATGAGCTTCTCGGTATACCCGAATCTGGCTCCTTGCTCGACATCAAACACGCTTACAAGCAGCTCGCACGCAAGTATCATCCCGATGTCTCCCCGCCCGATCGCCTCGAGGAGAATACCAGGCTTTTTTTGCAGGTCAAAGAGGCCTATGAGATCTTGTCTGATCCCAGAACCAGAGCCTTGTATGATAAAGACATCGCCAGGGGAATTCACTTGGCTTTCTCCGCTCGCCGACGCTACTACGACGATGACGTCAGTTCTTGCTTTTCTCTCATGCGATGCCCCAATATTTTTCTGATTTCTGTTTCTtctattattaaatttagtttatcATTTATGGCTCGGTGGGTAATTGAACAGAAAAGTGAATGGAAATGTCGTTGGCAATCTCAACTATCAGAGctgaagaaaagaagtagggcGAAGGATGCCGGAGAAAATATGTCATGGGCGGCTCGAATGCGCCGACGAAGGGAAGAATCATCTAATGAATTATAA 660 0.4394 MTGSDCRFFYLPSPKPKPLSVTHKSLNFPTRTAAFASFRVKSAINVAEAPKLSFYELLGIPESGSLLDIKHAYKQLARKYHPDVSPPDRLEENTRLFLQVKEAYEILSDPRTRALYDKDIARGIHLAFSARRRYYDDDVSSCFSLMRCPNIFLISVSSIIKFSLSFMARWVIEQKSEWKCRWQSQLSELKKRSRAKDAGENMSWAARMRRRREESSNEL 219
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0109 219 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 28 138 - -
Sto3g0109 219 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 172 216 - -
Sto3g0109 219 CDD DnaJ 54 109 IPR001623 -
Sto3g0109 219 Pfam DnaJ domain 54 117 IPR001623 -
Sto3g0109 219 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 172 216 - -
Sto3g0109 219 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 28 138 - -
Sto3g0109 219 MobiDBLite consensus disorder prediction 191 219 - -
Sto3g0109 219 SMART dnaj_3 52 112 IPR001623 -
Sto3g0109 219 ProSiteProfiles dnaJ domain profile. 53 120 IPR001623 -
Sto3g0109 219 PRINTS DnaJ domain signature 55 73 IPR001623 -
Sto3g0109 219 PRINTS DnaJ domain signature 73 88 IPR001623 -
Sto3g0109 219 PRINTS DnaJ domain signature 92 112 IPR001623 -
Sto3g0109 219 Gene3D DnaJ domain 40 141 IPR036869 -
Sto3g0109 219 SUPERFAMILY Chaperone J-domain 51 140 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto3g0109 Sto-Chr3 662500 664289 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0109 49 117 C2H2 Transcription Factor Family AT1G74250 40.278 6.59e-07 47.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0109 - - zju:107422310 177.948
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g0109 3 662500 664289 Sto3g0109 3 662500 664289 ECH