Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0076 ATGGGGGTGAAGGCTAAGAAAGCAATGAAGAAGAATCTAAAAAAGGCAACATCTAAGTTATCTGTTGCGAGCAACAAAACAGAGGGTGCCGACTTCTTGCCTTTGGAAGGTGGCCCTGCACGCAAACTTCCTGCACAACCACTACCAGAGAACACTGCCACAGTTTTATATATTGGTCGGATTCCACATGGATTCTATGAGAAGGAGATGGAAGGTTTCTTTGGACAATTTGGTACTATCAAGAACTTGAGAATTGCAAGAAATAAAAGGACAGGAAAATCTAAACATTTTGGGTTCATTGAATTTGAATCTCCTGAGGTGGCAAAAATTGTAGCTGATACTATGCACAATTATCTGCTATGTGAACACCTTCTGCAGGTTTCTCTGATACCTCCTGAGCATGTTCGTCCAAACATATGGAAAGGTTTCAATTATCGTTTCAAGCCATTGGACTTTGTTcaaattgaaagaaagaatcatgACAAGGAAAGAACATTGGAGGAGCACAGGAAGTTGGTCGAAAAGATCTTGAAGCGTGATGAAAAAAGGCGAAAGAGAATAGAAGCTGCTGGGCTTGATTATGAATGCCCTGAGATTGTGGGCAGTGATCAGCCTGGTcctaagaaaataaagtttgatGATTAA 645 0.3891 MGVKAKKAMKKNLKKATSKLSVASNKTEGADFLPLEGGPARKLPAQPLPENTATVLYIGRIPHGFYEKEMEGFFGQFGTIKNLRIARNKRTGKSKHFGFIEFESPEVAKIVADTMHNYLLCEHLLQVSLIPPEHVRPNIWKGFNYRFKPLDFVQIERKNHDKERTLEEHRKLVEKILKRDEKRRKRIEAAGLDYECPEIVGSDQPGPKKIKFDD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0076 214 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 1 213 - -
Sto3g0076 214 Gene3D - 3 136 IPR012677 -
Sto3g0076 214 PANTHER - 1 213 - -
Sto3g0076 214 Coils Coil 155 179 - -
Sto3g0076 214 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 123 IPR000504 GO:0003723
Sto3g0076 214 SUPERFAMILY RNA-binding domain, RBD 40 142 IPR035979 GO:0003676
Sto3g0076 214 Coils Coil 6 26 - -
Sto3g0076 214 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 54 132 IPR000504 GO:0003723
Sto3g0076 214 CDD RRM_NIFK_like 55 128 - -
Sto3g0076 214 SMART rrm1_1 55 128 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0076 54 127 Eukaryotic Initiation Factors Gene Family AT1G71770 31.081 1.25e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0076 K14838 - gmx:100778780 338.191