Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0070 TTGGCGGTTATAAAATGCGCCATCCAGCTCAACATCCCGGACACCGTTGATCTGAAAACCCCAATCACACTCTCTCAACTCTGCACAACCCTCAAGTGCGACCCCTGCTTCCTGTACCGCATCATGCGCTTCCTCACCCACCGCAACATCTTCAAGCAAATACGAATCCCTTCCTCTGAAGAATCTGATCCCCTCTATGCTTATGCCCACACCCCTCTCTCTCGCCTTCTCATGAAGCAAGGGGAACAAAGCATGGCGGCGTTGTTGCTGCTGGAGAGTAGCCCCGTGATGTTGGCGCCGTGGCAGAATCTGAGTGAAAGGGTGGTGGCGGAGGGGAGGGCGTCGTTTGAGAAGGCGCATGGGAAGGACGTGTGGAGTTATGCGGAGGAGAATGCGGAGCACAGTCAGCTCATCAATGAGGCCATGGCGTGCGATGCGAGGAGGACGGTGAGAGTGATGTTGGAGGAGTGCAAGGAGGCGTTTGAAGGTGTAACAAGTGTGGTGGATGTGGGTGGAGGCAACGGCACAGCCATGACGCTGCTTCGGAAGGCATGCCCTTGGATCACTTGTATCAATTTTGACACGCCACATGTCATCGCTGCCGCTCCCAACTCTTCCCACGCCATCCAACACGTGCCAGGAGATATGTTCCTCGCTGTGCCTAAAGCTGATGCTGCCTTTCTCATGTGGGTATTGCATGATTGGGGAGATGAAGAATGCATCCAAATCTTGAAGACATGTAAGGAAGCCATTCCTCACAAAAATGGGAGGGTCATAATTGCAGAGGCTGTCATAGAAGAAGAAGGATTCAAGGATAAGTTGAAGGATGTGGGATTGATGCTGGACATGGTCATGATGGCTCACACCAATATTGGCAAAGAGAGGACTCTCAAGGAATGGGAATACCTCATCACTCAGGCTGGATTCTCCACTTTTACTCTCAAAAACATCAACTCCCTCAAGTCTATCATTATCGCTTTCCCATGA 987 0.5157 LAVIKCAIQLNIPDTVDLKTPITLSQLCTTLKCDPCFLYRIMRFLTHRNIFKQIRIPSSEESDPLYAYAHTPLSRLLMKQGEQSMAALLLLESSPVMLAPWQNLSERVVAEGRASFEKAHGKDVWSYAEENAEHSQLINEAMACDARRTVRVMLEECKEAFEGVTSVVDVGGGNGTAMTLLRKACPWITCINFDTPHVIAAAPNSSHAIQHVPGDMFLAVPKADAAFLMWVLHDWGDEECIQILKTCKEAIPHKNGRVIIAEAVIEEEGFKDKLKDVGLMLDMVMMAHTNIGKERTLKEWEYLITQAGFSTFTLKNINSLKSIIIAFP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0070 328 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 2 327 - -
Sto3g0070 328 CDD AdoMet_MTases 167 260 - -
Sto3g0070 328 Gene3D Vaccinia Virus protein VP39 78 328 IPR029063 -
Sto3g0070 328 Gene3D - 1 77 IPR036388 -
Sto3g0070 328 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 324 IPR029063 -
Sto3g0070 328 Pfam Dimerisation domain 3 46 IPR012967 GO:0046983
Sto3g0070 328 SUPERFAMILY "Winged helix" DNA-binding domain 2 80 IPR036390 -
Sto3g0070 328 PANTHER O-METHYLTRANSFERASE 2 327 IPR016461 GO:0008168
Sto3g0070 328 PIRSF O-mtase 1 328 IPR016461 GO:0008168
Sto3g0070 328 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 328 IPR016461 GO:0008168
Sto3g0070 328 Pfam O-methyltransferase domain 101 310 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0070 Sto-Chr3 412720 420406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0070 4 309 Monolignol Biosynthesis Gene Families AT5G54160 34.505 1.67e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0070 K22588 - gmx:100782951 385.571