Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0041 ATGGCTTCTCCTAGTGGTAGTGGAGCTTCTTCTGGTTGTAGCAGCAGCTATCTTCAGAACTCTGGCTCAGAGGGAGATGTGCAGCATCATATTATGGAggagagaaagaggaaaagaatGGTGTCCAATCGCGAATCAGCACGTCGATCCAGGATGAGGAAACAGCAACACCTGGATGATCTAGTGGTCCAAATTGGTCAGCTGAAGAAGGAGAACAGCCAGATCATCACAAGCATGGATATCACCACCAAGCTGTACTTAGACATTGAGGGAGAGAATGCAATTCTGAGGGTTCAGATGGCAGAGTTAAGCAACAGATTGCACTCTCTCAACCAAATCATACAATACATTAACTCAAGAAATTACCTCTTTGGAGACACACACATTAATGATTTTGGCTTCATCAACCCATGCAACTTTGTGTCTGTGAATCAACCTATCATGGCGTCTGCTGACATGTTTATTGACGATGAGGAGGAGGATGGTAACAAATGGAAGAGAAAAGAAGATGGTGATGTTGGGTGGGGCATAATTAAGAGCTTCTGA 546 0.4267 MASPSGSGASSGCSSSYLQNSGSEGDVQHHIMEERKRKRMVSNRESARRSRMRKQQHLDDLVVQIGQLKKENSQIITSMDITTKLYLDIEGENAILRVQMAELSNRLHSLNQIIQYINSRNYLFGDTHINDFGFINPCNFVSVNQPIMASADMFIDDEEEDGNKWKRKEDGDVGWGIIKSF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0041 181 SUPERFAMILY Leucine zipper domain 35 87 IPR046347 GO:0003700|GO:0006355
Sto3g0041 181 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Sto3g0041 181 MobiDBLite consensus disorder prediction 1 26 - -
Sto3g0041 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 75 IPR004827 GO:0003700|GO:0006355
Sto3g0041 181 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Sto3g0041 181 MobiDBLite consensus disorder prediction 1 54 - -
Sto3g0041 181 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 1 155 - -
Sto3g0041 181 Pfam bZIP transcription factor 35 84 IPR004827 GO:0003700|GO:0006355
Sto3g0041 181 MobiDBLite consensus disorder prediction 27 54 - -
Sto3g0041 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Sto3g0041 181 Gene3D - 33 88 - -
Sto3g0041 181 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0041 Sto-Chr3 275425 277341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0041 31 155 bZIP Transcription Factor Family AT4G34590 50.725 1.46e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto3g0041 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0041 K25786 - zju:107424682 174.866