Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0035 ATGTGGTATATCATATCAGGGGCTTACAAGTACGTGTCGGAGCTATGGCGGAAGAAGCAGTCAGATGTGATGAGATTCTTGCAGAGGGTTAGGTGCTGGGAGTACCGTCAGCAGCCATCGATTGTGCGTCTGACAAGGCCGACACGTCCTGATAAGGCTCGTCGGTTGGGTTACAAGGCCAAGCAGGGGTATGTGGTGTACCGTGTTCGTGTGAGGAGAGGTGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTACGGTAAGCCTACCAATCAAGGTGTTACCCAGCTCAAATTTCAACGCAGCAAGAGGTCTGTGGCTGAGGAACGTGCAGGCCGCAAGTTGGGAGGCCTAAGGGTTCTCAATTCCTACTGGATTAACGagGATTCCACCTACAAGTACTTTGAGATCATTCTGGTTGATGTTGCCCACAATGCCATTCGCAACGACCCCAGAATCAACTGGCTCTGCAATCCTGTGCACAAGCACCGGGAGCTCCGAGGCCTTACATCTGCTGGCAAGAAATACAGGGGCTTACGTGGCAGGGGACATCTCTACCACAAAGCTCGTCCTTCTCGCCGGGCCACCTGGAAGAGGAACAACACCCTCTCCCTTCGTCGCTATCGTTGA 630 0.5317 MWYIISGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0035 209 Pfam Ribosomal L15 7 195 IPR000439 GO:0003735|GO:0005840|GO:0006412
Sto3g0035 209 SMART Ribosomal_L15e_2 7 198 IPR000439 GO:0003735|GO:0005840|GO:0006412
Sto3g0035 209 Gene3D Ribosomal protein l15e 6 209 IPR024794 GO:0003735|GO:0005840
Sto3g0035 209 ProSitePatterns Ribosomal protein L15e signature. 51 74 IPR020925 GO:0003735|GO:0005840|GO:0006412
Sto3g0035 209 PANTHER RIBOSOMAL PROTEIN L15 5 209 IPR000439 GO:0003735|GO:0005840|GO:0006412
Sto3g0035 209 PANTHER RIBOSOMAL PROTEIN L15 5 209 - -
Sto3g0035 209 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 200 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0035 Sto-Chr3 230970 231682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0035 7 209 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.118 1.74e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0035 K02877 - zju:107405349 391.349