Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0028 ATGGAGGAGGAAGCCTTCCCAGCACTTCTGGCACTACTCTTTCTGCTCCTATCCCTTCATTTCATCACTAAAATTATTGTGAAAACCACCAGAAAACACCAAAATCTTCCTCCGGGAAGCTTAGGATGGCCTATTGTTGGAGAAACCTTGGAGTTTATGAGATGCGGTGGTGAGGGGAATCATGAAAGGTTCATAAGAGAGAGAATGGagaaatatgattggagggtgTTTAAGACTTCAATGCTGGGAGAAGCTATGATAGTGTTTTGCGGACCTGCAGGCAACAAGTTGTTATTTAGCAATGAGAACAAGAATGTCCAAGTATGGTGGCCCTCCTCCGTCAGGAAGCTCTTGCGCTCTTCTTTGGTTACCAAGGTTGGTTCTGAGGCTAAGACCATGAAAAGGCTCCTCACCACTTTCCTTAATCCTGAAGCACTCAAGAATTACTTGTCAAAAATGGACGCCATTGCACACACCCACATTCACACTCATTGGCAAGGTAAAGAGCAGGTGCTTGTGTATCCCACCGTCAAGAAATACACCTTTGAATTGGCTTGTAGCCTCTTTGCCAGCATTGAAGATTCCATCCATATCTCCAAACTTTCCTCACAATTTGATGAGTTTCTGAAAGGGGTGATTAGCTTCCCCGTCAACTTCCCTGGCTCAAGGTTTCATTGTGCAATGAGAGCTGCAAATGCAATCAGACAAGAACTCAAACTCATTATAAAGAAAAGGAGAGTTGATTTGGAAGACAAGAGCGCCTCACCTACTCAAGACCTTCTCTCCCACTTGCTTCTTACATCTGACACCACCGGCAGGTTTTTGACTGAAATGGAGATTATAGATAACATACTTCTTCTCTTATTTGCTGGTCATGATACTTCTAGATCAGTCATATCATCCATCTTCAAATATCTTGGCCAGTTTCCTCAAGTTTATCAACAGGTCTTGCAAGAACAACTAGAAATTTCCGAGGGGAAAGAGGCAGGGCAGTTGTTGCAATGGGAAGATATTCAGAAAATGAAGTACTCGTGGAATGTTGCATCTGAAGTCCTAAGACTATCTCCACCCGTGACTGGTTCTTATAGAGAAGCCTTGACCAACTTCACCTATGCTGATTATACCATCCCTAAAGGCTGGAAGTTGCTGTGGAGCACTGGTTCATCACACAAGGACCCCACATTATTCTCaaacccagaaaattttgaTGCTTCAAGGTTCGAAGGAGCAGGGCCTACACCCTTTTCATTTGTTCCATTTGGAGGAGGACCTCGGATGTGTTTGGGACAAGAGTTTGCTCGCCTAGAGATTCTCGTGTTTATGCATAATATTGTGAAAAGATTCACGTGGGAGTTATTGATTCCTGATGAGAAGTTTCAGTATGATCCCATGCTAAAACCTGCAAAGGGACTTCCAATACGCCTTCAACCTCTCCACATCTACCCAACTACGTCTTTCGCTTCACATGGATAA 1473 0.4277 MEEEAFPALLALLFLLLSLHFITKIIVKTTRKHQNLPPGSLGWPIVGETLEFMRCGGEGNHERFIRERMEKYDWRVFKTSMLGEAMIVFCGPAGNKLLFSNENKNVQVWWPSSVRKLLRSSLVTKVGSEAKTMKRLLTTFLNPEALKNYLSKMDAIAHTHIHTHWQGKEQVLVYPTVKKYTFELACSLFASIEDSIHISKLSSQFDEFLKGVISFPVNFPGSRFHCAMRAANAIRQELKLIIKKRRVDLEDKSASPTQDLLSHLLLTSDTTGRFLTEMEIIDNILLLLFAGHDTSRSVISSIFKYLGQFPQVYQQVLQEQLEISEGKEAGQLLQWEDIQKMKYSWNVASEVLRLSPPVTGSYREALTNFTYADYTIPKGWKLLWSTGSSHKDPTLFSNPENFDASRFEGAGPTPFSFVPFGGGPRMCLGQEFARLEILVFMHNIVKRFTWELLIPDEKFQYDPMLKPAKGLPIRLQPLHIYPTTSFASHG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0028 490 Gene3D Cytochrome P450 25 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PANTHER CYTOCHROME P450 26 19 468 - -
Sto3g0028 490 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE ISOFORM X1 19 468 - -
Sto3g0028 490 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 Pfam Cytochrome P450 37 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Sto3g0028 490 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto3g0028 490 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0028 Sto-Chr3 194760 196420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0028 33 382 Cytochrome P450 AT5G36110 42.493 4.13e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0028 - - gmx:100778750 719.539