Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0025 ATGAAGGGAGGGATAGGGAATGATGAGAGTAATAAGTTACCATCGAATCCTGAAGAAGTAGAAGTGCTACGGCGTGATTCAGGCGCAAAACCTTTGATTGCCTTCACATATGATGAACTAAAGGTAATCACAGGAAATTTTAGGCAAGATCGTGTGTTGGGTGGAGGAGGATTTGGAAGTGTTTACAAAGGATTTATTTCTGAGGACGTACGAGAGGGGCTTCCTCCTCTTCCTGTAGCTGTCAAGGCGGAAGTCATATTTCTGGGGCAGCTTTCTCATCCAAATCTGGTCAAATTAATTGGATACTGCTGCGAAGATGAACATAGGGTGCTAATATATGAGTATATGGCCCGTGGTAGTGTGGAAAACAATCTCTTCTCCAGAGTATTGCTTCCCTTGCCATGGTCCATAAGAATGAAGATTGCATTTGGTGCTGCAAAAGGACTTGCTTTTCTTCACGAAGCAGAGAAGCCAGTTATCTATCGCGATTTTAAGACATCCAACATTTTATTGGACCTGGAGTACAATGCCAAACTGTCTGACTTTGGGCTTGCTAAAGATGGACCTGTTGGGGACAAATCTCATGTGTCCACTCGCATAATGGGAACTTATGGATATGCTGCACCGGAGTACATATTGACAGGTCATCTGACCCCAAGAAGTGATGTATACAGTTTTGGGGTTGTTCTTCTTGAACTTCTGACTGGAAGAAAATCTCTAGACAAGTCACGACCTGCTCGGGAGCAGAACCTCACAGATTGGGCTTTTCCTTTGCtcaaggagaagaagaaattgGTAAATATCATTGATCCAAGGCTGGAAGGCGATTATCCCATGAAAGGACTTCATAAGGCCGCAATGTTGGCTTACCATTGCTTGAACCGCAATCCAAAGGCAAGGCCTTTGATGCGAGATATAGTTGACTCTTTGGAGCCTTTGCAGCTTCACAATGACCTTCCTATCGGAAAAACAATCACCATCATCACTCAACCTTAA 996 0.4307 MKGGIGNDESNKLPSNPEEVEVLRRDSGAKPLIAFTYDELKVITGNFRQDRVLGGGGFGSVYKGFISEDVREGLPPLPVAVKAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLEYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLTDWAFPLLKEKKKLVNIIDPRLEGDYPMKGLHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNDLPIGKTITIITQP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0025 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Sto3g0025 331 SUPERFAMILY Protein kinase-like (PK-like) 30 309 IPR011009 -
Sto3g0025 331 Gene3D Phosphorylase Kinase; domain 1 10 115 - -
Sto3g0025 331 Gene3D Transferase(Phosphotransferase) domain 1 116 321 - -
Sto3g0025 331 ProSitePatterns Protein kinases ATP-binding region signature. 53 82 IPR017441 GO:0005524
Sto3g0025 331 PANTHER OS01G0588500 PROTEIN-RELATED 8 323 - -
Sto3g0025 331 Pfam Protein kinase domain 48 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g0025 331 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 8 323 - -
Sto3g0025 331 ProSiteProfiles Protein kinase domain profile. 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0025 Sto-Chr3 180982 182786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0025 6 310 Glycoside Hydrolase AT3G07070 48.328 2.79e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto3g0025 Pkinase 3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0025 - - gmx:100775722 572.007