Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g0001 atgaagctAGGATTCGTTCtcatttctcttttattttgcgGGTTGATAGCTAGATCAGATTCTTCTTCAAAACCCAAAGACCCATACCTCGGAGTTGCTCCTGAAGATGACAATTATTACAAGTCGTCAGCTGTAATAAAATGTAAAGATGGATCCAAGGAATTCACCAAAGCACAACTCAATGACGACTTCTGCGACTGCCCTGATGGAACCGATGAGCCAGGTACTTCGGCATGTCCAAGTGGAAAATTTTTTTGTCGGAATGCTGGACATATTCCTCTTTCCCTATATTCATCGAGAGTGAATGATGGAATATGTGATTGCTGTGATGGAAGTGACGAATATGAAAGTAAAGTAAAGTGTCCAAATACTTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAACTGAAAAAGAAGATTGTGACATATCAAGAAGGCGTCTTATTGCGAAAGCAAGAAGTTGAACAAGCAAAGTTAGCTCTGGCAAAAGATGAGGCAGAACTTTCTAagttgaaaaaagaagaaagtatACTTAAAGGGATTGTGCAACAGCTAAAGGAGCATAAAGAACAGATAGAGAAGGCAGAGGAGAAGGACCGTTtgcaaaaggaaaaagaagagaagcaAAAAATGGAGGCTGAGAAGAAAGCTaatgaagaaaattttaaacttgaTGGAGAAGATACAGGGCTTAGAAATGAGGCTGTGAAGCAATCTGATGGCAAagacaatgatgtggcaaatCATGATAAAAGTGGATTTCTAGATGATTCTTCAATGCGTCAGGATGCAGTAGAGGACGAGAAGTTGGAAGTTGTACTTGATAATGATGATGGAGTCACCAATAGTCCTGGAAGCAAAGAATCTTCACTTAATGGAGTGGAAGAGGGATCAGATGTACCTGAAAATACTGAGGGATTGTCAAAAGAAGAGTTGGGTCGGCTTGTTGCTTCTCGTTGGACAGGAGAAAATCCTGGAACGCAAAGTGCTGAAGCTGATGCAACAATTAATAAGGCTGATGAAGATAATGATTTTTCAAAGGAGACAAATCATGAGGAATATGAAGGCTATGCATCTGAAACTGATGACGACAGCCGCAAATATGATGATGTAGATGTAGAGGATGAAATAGATGATGACTTTCAAGAGGAGGAGCATGATGACCTTAGTTCCTCCTACAAATCTGACTCTGATACTGGACCAGACTTGTCAGCAAATAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGTACGAAACATTTTTCAGGCTGTTAATTTATTCCAGACTCCAGTAAACCAGTCAGATGCTGCTCGTGTGCGCAAGGAGTATGATGAGTCTAGTACCAAATTGTCTAAATTGCagtcaagaatatcaagtttgaagCAAAAACTAAAACATGATTTTGGTCCCGAGAAGGAGTTCTATTCATTCTATGATCGTTGTTTCGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAAGAGGCATCTCAGGCAGAGGGCTATAGCACCACACGTTTGGGGCGGTGGGACAAATTTGAGGACTCATACAGAGTTATGGTTTTTTCTAATGGTGATAAATGCTGGAATGGGCCGGATAGGAGTTTGAAGGTCAGGCTAAAATGTGGGTTGACGAATGAGATAACTGATGTAGATGAACCAAGCCGTTGCGAGTATGCAGCTTTATTGTCTACTCCGGCCCTTTGCCAAGAGGAAAAGCTTAAGGAGCTCCAACACAAGCTAGACTTGATGAATAAGGAACAACCCCAAAACCATGATGAGCTGTGA 1800 0.3861 MKLGFVLISLLFCGLIARSDSSSKPKDPYLGVAPEDDNYYKSSAVIKCKDGSKEFTKAQLNDDFCDCPDGTDEPGTSACPSGKFFCRNAGHIPLSLYSSRVNDGICDCCDGSDEYESKVKCPNTCWEAGKVARDKLKKKIVTYQEGVLLRKQEVEQAKLALAKDEAELSKLKKEESILKGIVQQLKEHKEQIEKAEEKDRLQKEKEEKQKMEAEKKANEENFKLDGEDTGLRNEAVKQSDGKDNDVANHDKSGFLDDSSMRQDAVEDEKLEVVLDNDDGVTNSPGSKESSLNGVEEGSDVPENTEGLSKEELGRLVASRWTGENPGTQSAEADATINKADEDNDFSKETNHEEYEGYASETDDDSRKYDDVDVEDEIDDDFQEEEHDDLSSSYKSDSDTGPDLSANNPSWLEKIQKTVRNIFQAVNLFQTPVNQSDAARVRKEYDESSTKLSKLQSRISSLKQKLKHDFGPEKEFYSFYDRCFESKQNKYTYKVCPYKEASQAEGYSTTRLGRWDKFEDSYRVMVFSNGDKCWNGPDRSLKVRLKCGLTNEITDVDEPSRCEYAALLSTPALCQEEKLKELQHKLDLMNKEQPQNHDEL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g0001 599 MobiDBLite consensus disorder prediction 367 386 - -
Sto3g0001 599 Coils Coil 154 223 - -
Sto3g0001 599 Gene3D - 475 573 IPR009011 -
Sto3g0001 599 SUPERFAMILY Mannose 6-phosphate receptor domain 482 573 IPR009011 -
Sto3g0001 599 Coils Coil 437 464 - -
Sto3g0001 599 ProSiteProfiles MRH domain profile. 480 575 IPR044865 -
Sto3g0001 599 Gene3D - 75 126 IPR036055 GO:0005515
Sto3g0001 599 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 4 240 IPR039794 -
Sto3g0001 599 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 284 599 IPR039794 -
Sto3g0001 599 MobiDBLite consensus disorder prediction 193 407 - -
Sto3g0001 599 Pfam Glucosidase II beta subunit-like protein 441 596 IPR036607 -
Sto3g0001 599 Pfam Glucosidase II beta subunit-like 14 170 IPR028146 -
Sto3g0001 599 PANTHER BNACNNG14010D PROTEIN 4 240 - -
Sto3g0001 599 PANTHER BNACNNG14010D PROTEIN 284 599 - -
Sto3g0001 599 MobiDBLite consensus disorder prediction 335 366 - -
Sto3g0001 599 MobiDBLite consensus disorder prediction 193 269 - -
Sto3g0001 599 Coils Coil 571 591 - -
Sto3g0001 599 SUPERFAMILY LDL receptor-like module 77 116 IPR036055 GO:0005515
Sto3g0001 599 MobiDBLite consensus disorder prediction 279 297 - -
Sto3g0001 599 CDD LDLa 79 114 IPR002172 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g0001 Sto-Chr3 13162 29576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g0001 21 599 Calmodulin-binding Proteins AT5G56360 58.136 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g0001 K08288 - gmx:100807083 802.742