Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2846 ATGCCCTCCGTGCTCGCATCTTTGGAACACACCAGACCTTTTGACTTACTTGGCCGTGTGTTGGATCCTCCATTGGTCCCTCCTCATCCTTATTCGTATTTAGCTGATCGTTACCGTGTTCCAAGCATTAGAATCCTGATGCGAGTCAAAACTGAAGCCCAAAGCCTGAATATTCTTTCATGCTTCTCCAGTAAATGTAGCAATCTATTTGGTAATGTGAAAGCTACAAATGGAAATGGTGGCCTCAAAGTTATATTCAATGACTTTCCCGGTGGAGCATGTGGATTTGAGCTCATTCTACGGTTTTGCTACAACAGTACAAGTAGAAGGAGGATGGTGATAACACCTTCCAACATAGTCCTGCTTTATTGTGCTGCTCATTTCATGGAGATGCAAGGTGATGCTCCTACTGGAACACCTAACTTGATATCCCAAATTGAAAAATTCCTTCAACAAGGGATTTATTTCTGGAGTTTGGGGGAGCTGCTTGAAGCACTCACACACTACTCAATTTCTGCCAAAAGCTATTCAGTGATTAGGGACAGAATCATAGGTCACCTCATAGAGAGGCTTGTTTTTCCCAGTTGTTCCTCTAATACATCTAGTTTCCAGTTTTCTTGTGCCAGTAGCTGCAGACATAACTGCTCTGGGGCTACTTGGTGGTTTGAACCTCTTCTCTTCTTCAACATTGATTTGATTGACAAGAGCGAACAAGCATATGATGTTGGTTTTGTGCTGAGGATCGTACAAATATTTGTCAATGAAGGCGATTTTGGGATATCTTTGATTCAACTTAAAAGAGTAACAAAATTGATGGACTCATTCCTAGTTGAAGTTGCTCCAGATCCCCGTCTCAAACCTTTTGAGTTTGCAGAATTAATCACAGTGCTCCCAGATTCAGCAAGAGAATCTCATGATCAATTGTACCTAGCTATGGACATGTATCTAAAAGTTCATGCAGGATTAAGTGAAAAGGAAAAGATGAATATCTGCTTTGCACTAAACTATGAAAAGCTGTCAGCTGAACTTGTGAGGCATCTTACAAGGAACTTGGTATTTTCTGCAGAAACAAAGCCCAGAGCTCATACTCATACACCCGGCAGAATGAAAAGCTTAGTTCAAGAAAATGATCATCTGAAAAACTTTCTTGACTCACTGTTTCGTAAAAGCTTTAAGAATACAGATGGTAGAAAAGAGGATGCTGAAGAGCTCAAGCCTATGGGAGATATGAAACGTACACAGGTAAAGAACAATCCTGAGAAAGCAGAGACCCTTCCTGTTTGCGTCAAGGGAGCTGATTCCAGCGCATCATTGTCAGGCTCCAATGTGGGTCTGGAGTCACCTAGATCATCTGAATGGAGTAACATGCCTCTTTGGTTGGAAGGACTTAGGAGGAAGGATGTAGTTTCTGCATGCGGAATTCCGAAGTATTCTTTCGAGTATGGAGCATTTGGTTCTATTTACAAAGCACAGATGCTCACTGGTGACACAGTTGCTGTTAAAGTTCTTGGTACTAATTCAAGACAAGGAGAGAGGGAGTTTTTAACTGAGGAAGATGATGGGCTCCCGAGGACAAAGGGAAAAAGAGCTGTGAGAAATTTGTTCAGTAAAGATTTAGGTGAGAATCAGGAGCCATTGGATTGGGATGCAAGACTTCACATAGCACTAGATGTAGCAAGGGGACTTGAATATCTACATTATGGGGCTGCTCCACCTGTTGTGCACCGTGACATCAAATCATCCAACATATTGCTGAACCAGTTTCTGAGAGCCAGGGTGACTGACTTTGGGCTTTCTAGACCGGAGATGCTTAAACCTCATTCATCTAAGGTCAGAGGAACTTTAGGATATCTTGATCCTGAGTACATGTCTACAAAAACCTTTACTAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTGTTTGAACTGATTACTGGCAGGAGTCCACAGCAGGGTCTAATGGAATATGTGAAATTAGCAACTATGGAGGGTGAGGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAGCTAAATGGGAAATATGATATGCATAAGCTTAACGATATGGCTGCCCTTGCTTTGAAATGTGTAAATGAAACGTCCAGAAACCGACCTTCGATGAGGGACATTGTTGGATCATTATCTCAGCTTTGTAAGAAGCATagttga 2181 0.4177 MPSVLASLEHTRPFDLLGRVLDPPLVPPHPYSYLADRYRVPSIRILMRVKTEAQSLNILSCFSSKCSNLFGNVKATNGNGGLKVIFNDFPGGACGFELILRFCYNSTSRRRMVITPSNIVLLYCAAHFMEMQGDAPTGTPNLISQIEKFLQQGIYFWSLGELLEALTHYSISAKSYSVIRDRIIGHLIERLVFPSCSSNTSSFQFSCASSCRHNCSGATWWFEPLLFFNIDLIDKSEQAYDVGFVLRIVQIFVNEGDFGISLIQLKRVTKLMDSFLVEVAPDPRLKPFEFAELITVLPDSARESHDQLYLAMDMYLKVHAGLSEKEKMNICFALNYEKLSAELVRHLTRNLVFSAETKPRAHTHTPGRMKSLVQENDHLKNFLDSLFRKSFKNTDGRKEDAEELKPMGDMKRTQVKNNPEKAETLPVCVKGADSSASLSGSNVGLESPRSSEWSNMPLWLEGLRRKDVVSACGIPKYSFEYGAFGSIYKAQMLTGDTVAVKVLGTNSRQGEREFLTEEDDGLPRTKGKRAVRNLFSKDLGENQEPLDWDARLHIALDVARGLEYLHYGAAPPVVHRDIKSSNILLNQFLRARVTDFGLSRPEMLKPHSSKVRGTLGYLDPEYMSTKTFTKKSDVYSFGVLLFELITGRSPQQGLMEYVKLATMEGEGEGKVGWEEIVDSQLNGKYDMHKLNDMAALALKCVNETSRNRPSMRDIVGSLSQLCKKHS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2846 726 Gene3D Phosphorylase Kinase; domain 1 480 527 - -
Sto2g2846 726 ProSiteProfiles Protein kinase domain profile. 473 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2846 726 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 414 517 - -
Sto2g2846 726 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 541 723 - -
Sto2g2846 726 ProSiteProfiles NPH3 domain profile. 240 368 IPR027356 -
Sto2g2846 726 SMART serkin_6 473 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2846 726 Pfam NPH3 family 235 342 IPR027356 -
Sto2g2846 726 PANTHER OS01G0253100 PROTEIN 414 517 IPR045271 GO:0004714|GO:0006468
Sto2g2846 726 PANTHER OS01G0253100 PROTEIN 541 723 IPR045271 GO:0004714|GO:0006468
Sto2g2846 726 SUPERFAMILY Protein kinase-like (PK-like) 481 716 IPR011009 -
Sto2g2846 726 Gene3D Transferase(Phosphotransferase) domain 1 533 726 - -
Sto2g2846 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
Sto2g2846 726 Pfam Protein tyrosine and serine/threonine kinase 539 717 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2846 Sto-Chr2 41918196 41930878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2846 482 722 Receptor kinase-like Gene Family AT2G19190 39.114 8.49e-44 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Sto2g2846 PK_Tyr_Ser-Thr 1.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2846 - - lang:109332283 416.387