Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2817 ATGGAGAATTATTCATACCCTTCCTACCCAGATTCTCATGATTCTTCTCCACGCTCTAGAGAGATCGATTTCGAGAACCCTCCGCCCTGGGACGATCAGCAACCGCCGCCCAATTACAAAGCCAAATTCATGTGCAGTTACGGCGGCAAGATCCAACCCCGGACCCACGACAACCAGCTCTCCTACGTCGGCGGCGAGACTAAGATCCTCGCCGTCGACCGCAACGTCAAGTTTTCCGCCATCATTTCCAAGCTCTCTGCCATCTGCGACGGCGCCGACGTCACCTTCAAGTACCAGCTTCCCGGCGAAGATCTTGACGCCTTGATATCTGTCACAAACGACGACGATCTCGAGCACATGATGCACGAGTATGATCGACTCATCCGCGCTTCGGCTAAGCCGGCTCGTATGAGGCTCTTCCTCTTCAACGCCAATAACCCGCCGGACCCGGTTAAACCCGCGCCTGTTTCTGGCCACAACGTCGACTACCTCTTCGGTCTCGACAAGGGAGTGGTTCCTCATCATCAGCCTCCACCCGTAGCTGTGAAGTTTCATGATCCGGTGCCGGAACCTACGGCGCCGCCGCCGCTTCAACCACCGGAGTACCAAGTACGAGAAGGTTTAAACCCTAGTGACCCGACTGAGATTCAGAGGCAATTACAGCAGGAGATGCAGAGGTTTCAAATTTCTGATCATGATCAATCTGGCTATCGGAGAAAAAGCGAAAACAATCTAGTCGGAGGCTACACTGCCGCCGGAGATTATTACGTACAGAAACTACCAGAAAGACCTCCACCATCTAGTTTTCCAGCAGCCGCACCACCGGCGGGAAGTTATTGGCCGGAAAAGCATCTCTCCGGTGAGGGTTTTCCGGTAACAGTGACAAACGCGCCGGGACCGTTCTACCAAGCGCAGATGGTTCGGCCGGCGCATCCGACTCCACAGGCGGCGACTCAAGGGTACTACACAGTGCAGCGAATGAACTCCGATGGTTACCGTGAGCAGCAGGTGTACGGCGGCGCACCCCCGCAGAAACTGCCATTTTCATCGGCACCTCCGCCGACGATGGCACCGGCGCAGCAGAAACCATCGACGTACACAGAAGGATACGGTGTGGCTAGGGCAGCAGGAGGGATTCCGGATAGCACGACGGGTGCATACGCACAAGTGTCGTATGATCATGGTGGAGGTGGGAGACAAGTATACTACACTGCACAAGGTGGTGTAGTGCACGCGCCGCCGCCGTACCAAGGTGTTGCTCCGCCGGTGACGGCTGATATGAGGCCGGGAGGGGTGTCATTAGGTCAGGATGTTAAAGTGGTAAACAAGGGTTCACAAGGTTCAGTGtga 1350 0.5556 MENYSYPSYPDSHDSSPRSREIDFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNVKFSAIISKLSAICDGADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLIRASAKPARMRLFLFNANNPPDPVKPAPVSGHNVDYLFGLDKGVVPHHQPPPVAVKFHDPVPEPTAPPPLQPPEYQVREGLNPSDPTEIQRQLQQEMQRFQISDHDQSGYRRKSENNLVGGYTAAGDYYVQKLPERPPPSSFPAAAPPAGSYWPEKHLSGEGFPVTVTNAPGPFYQAQMVRPAHPTPQAATQGYYTVQRMNSDGYREQQVYGGAPPQKLPFSSAPPPTMAPAQQKPSTYTEGYGVARAAGGIPDSTTGAYAQVSYDHGGGGRQVYYTAQGGVVHAPPPYQGVAPPVTADMRPGGVSLGQDVKVVNKGSQGSV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2817 449 CDD PB1_UP2 44 142 - -
Sto2g2817 449 SUPERFAMILY CAD & PB1 domains 56 146 - -
Sto2g2817 449 MobiDBLite consensus disorder prediction 1 36 - -
Sto2g2817 449 Gene3D - 61 144 - -
Sto2g2817 449 SMART PB1_new 55 144 IPR000270 GO:0005515
Sto2g2817 449 PANTHER OS05G0427100 PROTEIN-RELATED 1 443 - -
Sto2g2817 449 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Sto2g2817 449 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2817 Sto-Chr2 41719352 41720839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2817 39 144 MAP Kinase Kinase Kinase AT5G57610 49.057 1.23e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2817 - - adu:107480527 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2817 2 41719352 41720839 Sto2g2817 2 41719352 41720839 ECH