Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2808 ATGGCTTCTTGGGAAGTTGATCATCACACACCAAACCTATTCTTCTTCTACAAACTAAAAGTCATATTTTTCCTCTTCATAATCATCCCTCCTGCAAATCAGTTATCTTTTAACTACCCTAGTTTTGCACAAGGTGATGTGAAGCTGGATGGAGATGCTTCTCTTGTACGTTCACAAATCCGCCTAACACTCGACACACGGTACGAAAACAACAATTACAGTGTAGGACATGTCACAAGTTTCCAACCCATGCTTCTCTGGGACAAGACATCAAGAAATCTCACTGATTTCTCAACCACCTTCTCATTCACCATATATTCACAAAACACATATTTTGGAGATGGCTTGACAATCTTCCTAGCAGATCAAAATCTCCCACTTTTGAAGAAAATCTCAGAAGGAGGTGGCCTTGGACTAGTGGATGGTGACCAAGTATTGAACTCAACTCAACATTCATTTCTGGCAGTGGAGTTTGACACTTACACAAATCCATGGGACCCACCTTTTATTGGTCCACATGTGGGTATAAATTTGAACTCTATGAACTCTACCATATTTGCCCAATGgtatgatgaagatgaagggaAACTGATACAGAATTTTCTTTCATATAAGGTTGATTTGAGAGAGTACTTACCTGAGTGGGTTAATGTTGGTTTCTCTGCTGCAACAGGAGATTTGTTTGAATTACATACCCTTCAATCATGGTCATTTAGTTCAAGTTTAGAaagccagaattcacagaagaaaaagaaaacaaaaattggaCTTTATGTTGGGCTAGGCATAGGTATACCTATGGCTTTGGCTTCCATAGGATTGGTTTTCTTCTTGTTGTGGAAGTGGAAGAAAAGTAAAggtaataaaaaagaagaagaatcagATCATGATCAGAAGATGGATGATGAATTCCAGAAGGGAAATGGACCAAAGAAGTTTGTCCATGATGAATTGGTAACTGCAACAAATGACTTCTCCGAGGAGCAGAAGCTCGGGCACGGCGGGTTTGGTGGAGTTTATAAAGGCTTCTTGAAGGAACTAAATGACCATGTTGCTATAAAGAGGATATCAAGAGAGTCCAAACAAGGGATGAAGGAGTATGCTACTGAAGTAACCATAATTAGCCAACTGAGACACAAGAATTTGGTACGCCTCATCGGTTGGTGCCACAAGAAGAAAGATTTCCTCCTTGTATACGAGTTCATGCCGAATGGAAGCTTAGATTTACATCTACAGCATGAAAAAagcttcttggcatgggaggtgaGGTATAACATTGCTCTAGACTTGGCTTCAGCACTATTATACTTGCATGAAGAAAGAGAGCAATGTGTGCTTCATAGAGACATTAAATCAAGCAATGTTATGTTGGACTCAAACTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCCAAGTTGGTGGATCATGAGAAAGGATCAGACACAACAAATATAGTTGGGACCAGAGGATACATAGCTCCAGAGTATATCACCACAGGAAAGGCAAGTAAGGAATCTGATATATACAGCTTTGGGGTTGTTTTATTGGAAATAGCCAGTGGAAGAAAACCCACTTACTTAGATATGAAGAAAGGTCAAATGACTATAGTTGAGTGGGTTTGGGAGGTGTATGGAGATGAAGATATCCTTGAAGTAGCAGATCCAAACCTAAGTGGGGAATTTGAGGAGGAGCAAATGAAACGTTTAGCAATTGTTGGGATTTGGTGTGCTCATCCAGATTACTTGTGTAGGCCTTCCATCATGCAAGTGATTCAAGTTCTTAAGTTCCAAGCTTCTTTACCATCTCTCCCACAGAAGATGCCTGTGCCAATTTTCCTTCCTCCAACAATAAATGCTTCATCTGCCAATCTGGATGCATCTTAG 1884 0.3806 MASWEVDHHTPNLFFFYKLKVIFFLFIIIPPANQLSFNYPSFAQGDVKLDGDASLVRSQIRLTLDTRYENNNYSVGHVTSFQPMLLWDKTSRNLTDFSTTFSFTIYSQNTYFGDGLTIFLADQNLPLLKKISEGGGLGLVDGDQVLNSTQHSFLAVEFDTYTNPWDPPFIGPHVGINLNSMNSTIFAQWYDEDEGKLIQNFLSYKVDLREYLPEWVNVGFSAATGDLFELHTLQSWSFSSSLESQNSQKKKKTKIGLYVGLGIGIPMALASIGLVFFLLWKWKKSKGNKKEEESDHDQKMDDEFQKGNGPKKFVHDELVTATNDFSEEQKLGHGGFGGVYKGFLKELNDHVAIKRISRESKQGMKEYATEVTIISQLRHKNLVRLIGWCHKKKDFLLVYEFMPNGSLDLHLQHEKSFLAWEVRYNIALDLASALLYLHEEREQCVLHRDIKSSNVMLDSNFNAKLGDFGLAKLVDHEKGSDTTNIVGTRGYIAPEYITTGKASKESDIYSFGVVLLEIASGRKPTYLDMKKGQMTIVEWVWEVYGDEDILEVADPNLSGEFEEEQMKRLAIVGIWCAHPDYLCRPSIMQVIQVLKFQASLPSLPQKMPVPIFLPPTINASSANLDAS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2808 627 SUPERFAMILY Protein kinase-like (PK-like) 310 615 IPR011009 -
Sto2g2808 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Sto2g2808 627 Gene3D - 195 257 - -
Sto2g2808 627 Gene3D - 32 194 - -
Sto2g2808 627 Pfam Legume lectin domain 35 184 IPR001220 GO:0030246
Sto2g2808 627 Pfam Legume lectin domain 196 252 IPR001220 GO:0030246
Sto2g2808 627 Gene3D Phosphorylase Kinase; domain 1 310 401 - -
Sto2g2808 627 ProSitePatterns Legume lectins beta-chain signature. 154 160 IPR019825 -
Sto2g2808 627 PANTHER - 198 620 - -
Sto2g2808 627 PANTHER - 20 190 - -
Sto2g2808 627 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 20 190 - -
Sto2g2808 627 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 198 620 - -
Sto2g2808 627 CDD lectin_legume_LecRK_Arcelin_ConA 35 233 IPR001220 GO:0030246
Sto2g2808 627 SMART serkin_6 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2808 627 ProSitePatterns Legume lectins alpha-chain signature. 212 221 IPR000985 -
Sto2g2808 627 ProSiteProfiles Protein kinase domain profile. 325 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2808 627 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 250 IPR013320 -
Sto2g2808 627 Gene3D Transferase(Phosphotransferase) domain 1 402 614 - -
Sto2g2808 627 Pfam Protein kinase domain 325 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2808 627 CDD STKc_IRAK 331 595 - -
Sto2g2808 627 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2808 Sto-Chr2 41625107 41627077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2808 21 612 Receptor kinase-like Gene Family AT5G10530 44.409 6.55e-174 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto2g2808 Pkinase 1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2808 - - gmx:100780181 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2808 2 41625107 41627077 Sto2g2808 2 41625107 41627077 ECH