LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g2800	ATGGAGGCATCCCATCACAGAATGAAAAAtaatcttcttccttctttggCCATAACCAAAAATATTCTGTGGTTTCTTATTATAATACCTGGTGCAGCTACCACAATAACCTTTAATTATCAGCAATTTCTTGACAAAAATAACTATGAACACAACTTGAAGCTGGAAGGAGATGTTTATCAGGAAAACGGCTTCCTGCAACTTACCAGGAATGGGCCAGACAGTGCTGGGAGGGTAACATACAACAAACAACTTCAACTTTGGGACAGCAACACCAAAAAACTTGCAGATTTCAATACCCatttctccttcatcatcaactCTTCAGATTCAAACCATCTTGGAGATGGCATCACTTTCTTCCTAGCACACCCCAACTTTCCACTTCCAAAGCCTCCAGATGGTTCTGGAATTGGTCTTGTGGGTCGCAGAGAAATGTCAGATCCAAATTACCCACAACAACATCCATTTGTGGCAGTGGAATTTGATACTTTTCCCAACAAAagacttggtgatccaccataTGATCATGTAGGCATAGATGTGAAAAAGATGTGGACTCCTTACACAACACAATGGTACAATGTCAAAGATGGTAAAAAAGTGTATGATGCTGAAATTACCTACAATTCTAGCTCACACATGTTGAATGTTGCTTTCACTGGATACAAGAATGACACCAAAATAAAACAAGAGTATTCCCATGAGATTGATTTCAGAGATTTCTTGCCAAATCAAGTTCAGTTTGACAGTGATTTTGAAAGAAGCATTATTGGACCAAAGGGGTTTTCCTACAAGGAACTTGTGAAAGCCACAAACAATTTTGCAGAGGAAAAGAAGCTAGGAGAAGGAGGCTTTGAATGGAAGCATTGTGTAGTGCATAGGGACATAAAACCTAGCAATATTATGTTGGATTCAAATTTCAATGCTAAGCTCGGCGATTTCGGGTTAGCGAGACTAGTAGATCATGATAAGGGATCATCAGAGACAACAGTCATAGCAGGAACAAAAGGATACATGGCTCCTGAATCTGCAACCGTAAACAAGGCTACGAAAGAGTCAGATGTGTACAGTTTTGGAGTGGTGGCGTTGGAAATCGCGTGCGGGAGAAAGCCTATTGTATATAGTGCTAGTGAAGAACAAGTGGTGATGGTGGAATGGGTGTGGGAGCTGTATGGCTTGGAGAAACTTCCAGAAGCAGCTGATCCTAGGTTACGTGGAGACTTTAAGGAGGAGGAATTGGAGAGGTTAATGATTGTTGGGCTTTGGTGTGCTCATCCAGATTATGTTTTGAGACCCACAATAAGACAAGCAATGAATGTGCTTAATTTTGAAGCTTCATTGCCTATTTTGCCACCAAAGATGCCTAAACCTACTTATATTGTTCCTTCTTTTTCTGAAATTGGTGCTTCCTCAAGCTGTTTCAATCCTAATAATCCTAAGTCTGGTGGGTCATACACAGGGTCTTCTGAAGCAACCATGTCAGACACAAGTTTACTTCCAAGATAA	1509	0.3903	MEASHHRMKNNLLPSLAITKNILWFLIIIPGAATTITFNYQQFLDKNNYEHNLKLEGDVYQENGFLQLTRNGPDSAGRVTYNKQLQLWDSNTKKLADFNTHFSFIINSSDSNHLGDGITFFLAHPNFPLPKPPDGSGIGLVGRREMSDPNYPQQHPFVAVEFDTFPNKRLGDPPYDHVGIDVKKMWTPYTTQWYNVKDGKKVYDAEITYNSSSHMLNVAFTGYKNDTKIKQEYSHEIDFRDFLPNQVQFDSDFERSIIGPKGFSYKELVKATNNFAEEKKLGEGGFEWKHCVVHRDIKPSNIMLDSNFNAKLGDFGLARLVDHDKGSSETTVIAGTKGYMAPESATVNKATKESDVYSFGVVALEIACGRKPIVYSASEEQVVMVEWVWELYGLEKLPEAADPRLRGDFKEEELERLMIVGLWCAHPDYVLRPTIRQAMNVLNFEASLPILPPKMPKPTYIVPSFSEIGASSSCFNPNNPKSGGSYTGSSEATMSDTSLLPR	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g2800	502	ProSiteProfiles	Protein kinase domain profile.	65	429	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto2g2800	502	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	292	304	IPR008271	GO:0004672\|GO:0006468
	Sto2g2800	502	Pfam	Legume lectin domain	36	247	IPR001220	GO:0030246
	Sto2g2800	502	PANTHER	RECEPTOR LECTIN KINASE	248	286	-	-
	Sto2g2800	502	PANTHER	RECEPTOR LECTIN KINASE	21	249	-	-
	Sto2g2800	502	PANTHER	RECEPTOR LECTIN KINASE	287	472	-	-
	Sto2g2800	502	ProSitePatterns	Legume lectins beta-chain signature.	158	164	IPR019825	-
	Sto2g2800	502	Gene3D	-	34	249	-	-
	Sto2g2800	502	SUPERFAMILY	Concanavalin A-like lectins/glucanases	34	248	IPR013320	-
	Sto2g2800	502	SUPERFAMILY	Protein kinase-like (PK-like)	290	462	IPR011009	-
	Sto2g2800	502	PANTHER	-	248	286	-	-
	Sto2g2800	502	PANTHER	-	21	249	-	-
	Sto2g2800	502	PANTHER	-	287	472	-	-
	Sto2g2800	502	MobiDBLite	consensus disorder prediction	476	502	-	-
	Sto2g2800	502	Gene3D	Transferase(Phosphotransferase) domain 1	284	462	-	-
	Sto2g2800	502	Pfam	Protein kinase domain	289	440	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto2g2800	502	CDD	lectin_legume_LecRK_Arcelin_ConA	38	264	IPR001220	GO:0030246
	Sto2g2800	502	SMART	serkin_6	175	447	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g2800	Sto-Chr2	41577407	41581529	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g2800	287	460	Receptor kinase-like Gene Family	AT5G10530	60.452	6.76e-62	212

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Sto2g2800		Lectin_legB	1.6e-46	CL0004

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g2800	-		-	gsj:114386659	296.204