Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2799 ATGGTTGAGTCTCTTAAGCATGTTGTCATGGGTTTGAACCATGCCATATCCTCAGTAAGCTTCAACTATCACCAATTTCTTGAGAAAGATAATTATGAGAAGAACTTGAAGTTTGAAGGAGATGTTTATCAGGAACAGGGGCTCCTCCAACTCACCAGGAATGGACCAGACAGTGCAGGGAGAGTAACATTTAACAAACACCTACAACTTTGGGACACTAACACCAAAAAACTTGCAGATTTCACTACCCATTTCAGCTTCATCATCAATTCATCAGATTCAAACCATCTTGGAGATGGCATCACTTTCTTCCTAGCACACCCCAACTTTTCACTTCCAGTTCCTCCAGATGGTTCCGGAATCGGTCTCGTGGGTCGCAGAGAAATGGCAGATCCTAATTACCCAGAAGAACATCCATTTGTAGCAGTGGAGTTTGATGCATTTCCTAATGAAGACCTTGGTGATCCACCATATGATCATGTAGGAATTGATGTGAAGAAGATGTGGACTCCTTACACAACACAATGGTACAATGTCAAAGATGGTAAAAAAGTGTATGATGCTGAAATTACCTACAATTCTAGCTCACACATGTTGAATGTTGCTTTCACTGGATACAAGAATGACACCAAAATTCAACAAGAGTATTCCCATGAGATTGATTTGAGAGATTTCTTGCCAAGTCAAGTTCAGTTTGGTATTTCTTCATCTACAGGACTTATTTTTGAGACTCACACACTATGTTCATGGTCCTTCAATTCAAGTGGTATAGCATTATTGGAAGAAAACAAGGATAAGAGCAAGAGTGAGATCAAAAGTAAGAGCAAGAAGAAGATGGTTATATGGGTAAGCATGATTGGATCAATTGTATTGATTTGTGGGTTATGTTCTGTTTGGCTTATGATATGGAAGATGAagagtaagaaaaagaaatatgagtTTGATCATAATTCATTGGACAATGATTTTGAAAGAAGCACTGGACCAAAGAGATATGTCATTGCTCAAGGGCTAGCCTCAGCAATACTGTACCTACATGAAGAATGGGACCAATGTGTGGTACATAGGGACTTAAAATCAAGCAATGTTATGTTGGACACAAATTTCAATGCTAAGCTCGGTGATTTCGGGTTAGCGAGACTAGTTGAACACGACAAAGGGTCATCAGAGACAACAGTGATAGCAGGAACAAAAGGATACATGGCTCCTGAATGCGCAACCATAAGCAAGGCTACGAAAGAGTCTGATGTATACAGTTTTGGAGTCGTGGCTCTGGAGTTGGCCTGTGGGAGGAAGCCAATTGTGGTGATGGCGAGTCAAGAAGAACTCATCATGGTGGAAAGGGTGTGGGAGCTCTATGGCATGGGGAAAGTTCTAGAAGCAAGTGATCCTAGGTTATGTGGGGAATTTGAGGAGGAGAAGATGGAGAGGTTAATGATTGTTGGGCTTTGGTGTGCTCACCCAGATTATGTTTTGAGGCCCACAATAAGACAAGTAGTGAGTGTGCTTAATTTGGAAGGTTCGTTGCCTAGTTTGCCACCAAAGATGCCTAAACCTACTTATGTGGTTCCTTCTTTTTCTGAAATTGGTGCTTCATCATCAAGCTTTTTCTCCCCTAATAATGCTAAGTCTTTTGGTATTAATCAAAGCCAGGCTTCATATAGTGGGTCATCCCAAACAAATATGTCAGACACAGTTTTACTTCCAAGATAG 1713 0.404 MVESLKHVVMGLNHAISSVSFNYHQFLEKDNYEKNLKFEGDVYQEQGLLQLTRNGPDSAGRVTFNKHLQLWDTNTKKLADFTTHFSFIINSSDSNHLGDGITFFLAHPNFSLPVPPDGSGIGLVGRREMADPNYPEEHPFVAVEFDAFPNEDLGDPPYDHVGIDVKKMWTPYTTQWYNVKDGKKVYDAEITYNSSSHMLNVAFTGYKNDTKIQQEYSHEIDLRDFLPSQVQFGISSSTGLIFETHTLCSWSFNSSGIALLEENKDKSKSEIKSKSKKKMVIWVSMIGSIVLICGLCSVWLMIWKMKSKKKKYEFDHNSLDNDFERSTGPKRYVIAQGLASAILYLHEEWDQCVVHRDLKSSNVMLDTNFNAKLGDFGLARLVEHDKGSSETTVIAGTKGYMAPECATISKATKESDVYSFGVVALELACGRKPIVVMASQEELIMVERVWELYGMGKVLEASDPRLCGEFEEEKMERLMIVGLWCAHPDYVLRPTIRQVVSVLNLEGSLPSLPPKMPKPTYVVPSFSEIGASSSSFFSPNNAKSFGINQSQASYSGSSQTNMSDTVLLPR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2799 570 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 258 IPR013320 -
Sto2g2799 570 CDD lectin_legume_LecRK_Arcelin_ConA 19 256 IPR001220 GO:0030246
Sto2g2799 570 Pfam Legume lectin domain 19 264 IPR001220 GO:0030246
Sto2g2799 570 Gene3D - 16 283 - -
Sto2g2799 570 ProSiteProfiles Protein kinase domain profile. 227 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2799 570 PANTHER RECEPTOR LECTIN KINASE 16 332 - -
Sto2g2799 570 PANTHER RECEPTOR LECTIN KINASE 331 539 - -
Sto2g2799 570 SUPERFAMILY Protein kinase-like (PK-like) 325 529 IPR011009 -
Sto2g2799 570 Pfam Protein kinase domain 334 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2799 570 MobiDBLite consensus disorder prediction 551 570 - -
Sto2g2799 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Sto2g2799 570 PANTHER - 331 539 - -
Sto2g2799 570 PANTHER - 16 332 - -
Sto2g2799 570 Coils Coil 257 277 - -
Sto2g2799 570 Gene3D Transferase(Phosphotransferase) domain 1 316 523 - -
Sto2g2799 570 SMART serkin_6 220 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2799 Sto-Chr2 41569208 41573419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2799 331 521 Receptor kinase-like Gene Family AT5G10530 60.309 2.49e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto2g2799 Lectin_legB 1.7e-57 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2799 - - minc:123227737 439.113