Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2798 ATGGAAGCAACCCAATACTGTAAAATTCATCATCATCTCTTCATAATCACACCCATAACCTTAATCTTTCTCATATTCCCTTTTGCTTCTCCACTATCCATCAACTATGAGCAATTCACTCCCAATGATCCAACCTTAATTTTTCAAGGAGATGTTTTTTATGAAAAAGGGTTTCTTCAGCTCACAAAGTTTGAAAGAGACAGTCTTGGGAGAGTCACATACTACAAAAGCCTCCATCTTTGGGACAAAAGCTCAGGAAAAGTCACAGATTTCTCCACCCatttctccttcatcatcaattCACCAAACAGAAGTATCAATATTGGAGATGGCATCACATTCTTCCTTGCACCTCCAAGCTTCCCTCTTCCAGTTCCCAGAGATGGCAGTGGAATTGGACTTGTGAGTCGTACTCAATTGGAGGATCAAAACTACACGAATGAGAACCCTTTCGTGGCGGTCGAATTCGACACCATTTCTAATGATTGGGATCCTCCATATGATCATGTTGGTATAGATGTCAAGTCTATAAAAACAGCTTACACTACACAGTGGTTCAGTATCAAAGATGGGAGGAAATATGATGCTGTTATTAATTACAATTCTAGCTCATTCAATTTGAGTGTAAGCTTTAATGGGTATTATGAGAATAATACCAAAGTTGAACAGAATTTGTATCAAGTCATCAATATGACTGAAGTTCTCCCTGAGTGGGTTGAGTTTGGATTCTCTTCAGCCACAGGAGATTTCTTTGAGATCCACACACTTTGTTCCTGGTCCTTCAATTCAAGTTTAGACATGGAAGATCAGAACAATCAGAATCATAGCAGCAAGAAAGGACTAATAGTAGGTTTGAGCATTGGAGGAGGTGTTTTAATCTTTGGAATTGGGTTAATTTGGCTTGTGATAGTGAGTgtcaagagaagaagaagaagcatgtATGGTTTTGATTTTGATCCAACAATGGAGAATGAGTTTGAGAGAAGCACTGGGCCTAAGAGGTTTTCCTATAAGCAACTTGTGAAAGCAACTAACAAGTTTGCAAAAGAACTCAAGCTTGGAGAGGGAGATCAAACCCTCTTGACATGGGAAGCTAGATACAACATAGCTCAAGGCCTAGCCTCAGCATTATTGTATCTTCATGAAGAGTGGGAACAATGTGTGGTTCATAGGGACATAAAAGCCAGCAATGTAATGTTGGATTCGGGTTTCAACGCGAAGCTCGGAGATTTCGGATTAGCTCGGCTCGTAGACCATGGAAAAGGGTCTAAAACAACCGTGTTAGCCGGGACATTCGGATACATGGCTCCTGAATATGTCACTAAAGGGAAGGCTAGTAGAGAGTCTGATGTGTACAGTTTTGGAGTTGTTGCTTTGGAGATAGCATGTGGGAGAAAGTCAATAGAACCCGAATTCAACGAAGAAGAGGCTTCCTTAGTGGATTGGGTTTGGGAACTTCATAGCAGAAATGGTGTTCTTGAAGCAGCTGATAAGAGACTATGTGGGGACTTCAATGAGCAAGAAATGCTTAGGCTAATGATGATTGGACTTTGGTGTGCTAACACAGAGTGCATTCTAAGGCCTACTATTAGACAAGTGGTTCAAGTGCTTAATTTTGAAGCTTCAGTGCCTATTCTGCAATCACCCACCTATAATGCTGCTTCTGTGAGTAGTGCAATTACTTCTTCTTCAAGCTCTTTTGCCTCTAATAATACTAGTGCTTTTGGGATCAAACATACACTACCCTTCAGTGAAAGCTCTTTTACTGGGTCCTCACAATCAAGCACATCTTTTGCAGTCATTTCTCCTTCAGCTGCACTTCTACATACATACTGA 1836 0.3976 MEATQYCKIHHHLFIITPITLIFLIFPFASPLSINYEQFTPNDPTLIFQGDVFYEKGFLQLTKFERDSLGRVTYYKSLHLWDKSSGKVTDFSTHFSFIINSPNRSINIGDGITFFLAPPSFPLPVPRDGSGIGLVSRTQLEDQNYTNENPFVAVEFDTISNDWDPPYDHVGIDVKSIKTAYTTQWFSIKDGRKYDAVINYNSSSFNLSVSFNGYYENNTKVEQNLYQVINMTEVLPEWVEFGFSSATGDFFEIHTLCSWSFNSSLDMEDQNNQNHSSKKGLIVGLSIGGGVLIFGIGLIWLVIVSVKRRRRSMYGFDFDPTMENEFERSTGPKRFSYKQLVKATNKFAKELKLGEGDQTLLTWEARYNIAQGLASALLYLHEEWEQCVVHRDIKASNVMLDSGFNAKLGDFGLARLVDHGKGSKTTVLAGTFGYMAPEYVTKGKASRESDVYSFGVVALEIACGRKSIEPEFNEEEASLVDWVWELHSRNGVLEAADKRLCGDFNEQEMLRLMMIGLWCANTECILRPTIRQVVQVLNFEASVPILQSPTYNAASVSSAITSSSSSFASNNTSAFGIKHTLPFSESSFTGSSQSSTSFAVISPSAALLHTY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2798 611 PANTHER - 16 356 - -
Sto2g2798 611 PANTHER - 359 609 - -
Sto2g2798 611 SMART serkin_6 281 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2798 611 Gene3D - 31 279 - -
Sto2g2798 611 Pfam Protein kinase domain 359 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2798 611 ProSiteProfiles Protein kinase domain profile. 194 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2798 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Sto2g2798 611 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 269 IPR013320 -
Sto2g2798 611 Pfam Legume lectin domain 33 274 IPR001220 GO:0030246
Sto2g2798 611 SUPERFAMILY Protein kinase-like (PK-like) 358 550 IPR011009 -
Sto2g2798 611 CDD lectin_legume_LecRK_Arcelin_ConA 32 265 IPR001220 GO:0030246
Sto2g2798 611 ProSitePatterns Legume lectins alpha-chain signature. 235 244 IPR000985 -
Sto2g2798 611 PANTHER LECTIN RECEPTOR KINASE 16 356 - -
Sto2g2798 611 PANTHER LECTIN RECEPTOR KINASE 359 609 - -
Sto2g2798 611 Gene3D Transferase(Phosphotransferase) domain 1 349 554 - -
Sto2g2798 611 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2798 Sto-Chr2 41565086 41567158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2798 356 546 Receptor kinase-like Gene Family AT5G10530 60.825 1.31e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto2g2798 Lectin_legB 1.7e-64 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2798 - - minc:123227737 451.44