Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2791 ATGGGTACGATGAATCGTCAGCCACTGCAAGCACGGGCTTTCGAGGACAGAGAACAACAAGTGGTGCAGGTTCCCATGCAGGTGGATGAtttcgaaggtggattgaatgCTCAATGTGATGGGGTGGAAGAGGCTCGAGTGAGTTCTGGGTTATCTGGAACTAATTGTTGTGCTTTGCAGTCTCGAACCAGTGAGCTCACCATTTCGTTCGAAGGCGAGGTCTATGTTTTCCCAGCGGTTACGCCAGAAAAGGTCCGATTTCTTTGCAGCCTCTTTGATTTTTCATCGAAGCTCATTATAAGGATTGATTTTGAAGAAAGCGTTCAAGTGTTTTGCTCTAATTGTGATGACAAAACCACCTATTCTGACTTGTGTATACATAACGAGGTGCAGGCTGTATTATTACTGCTGGGAGGGCGGGAGCTACCCAGCCCCTGTAGTGTACCCAGCACTGAGTTTTTGCTCCAACAAAACTGTCAGAACATGAGGGGAATTAATGATACTTCCCGAGGTTCAAAGCTTTCACGGAGATTTGCATCCCTTGTTAGGTTCCGTGAAAAGCGGAAAGAGAGatgttttgagaagaaaattcgGTATAGCTGCCGCAAAGAGGTTGCACAGAGGATGCATCGAAAGAATGGACAGTTTGCATCAGTGAAAGAATGTTACAGTTCTGTTGCTGAAAACTGGGACTCAAGCAATGGTGCTCCTTGTTCTGAATCTACTGAACGTAGATGCCAGCATTGTGGAATTAGTGAAAAGTCTACTCCAGCTATGCGTCGTGGACCAGCTGGCCCCAGATCTCTGTGCAATGCCTGTGGGCTTATGTGGGCAAATAAGGGAACTCTGAGGGATCTCAGCAAAACAGGAAAGATCACTTCTTTTGAACAAAATGAACTGGATACTTCAGCTGAGATGAAGCCTTCAACAACTAAACCAGAAAATGCTTGTCCTGACCAGAATGATGCAGAAAGCCCTGAGGAGACTAAGCCTTTGCCAGTAGATTCCAGACAGTCACCCAAGAAGATAAATGAGCAGTATACGCTTGAAACTGCTGAAGCAGTTACTGATAACTTATCCATCCAAGTGGAGAATCTTGATGTTAATCTACATGAGCAGGATACTCTCGAAGATCTTGCCGACGCATCTGGAACAGATTTTGATATTCCTTCAGGTTTTGATGAACAGGACATCTTCGCTAAGGTTGGAAGCCAAACCACCATCGACCTTCCGCAGGTTGCCGTCGTCGGTAGCCAGAGTAGTGGCAAGTCCAGCGTCCTCGAGGCTCTTGTCGGTCGGGACTTCTTGCCGCGTGGTAATGATATTTGCACCAGGAGGCCGCTCGTGCTGCAGCTTGTGCAGACTAAGAGGAAGCCTGATGGCACTGCGGAGGAATATGGCGAGTTTCTTCACTTGAATGGGAAGAGGTTCTACGATTTCTCTGAGATTCGTAGGGAAATTCAGGCTGAAACTGAGAGGGAAGCAGGAGGGAATAAAGGTGTCTCGGACAAGCAGATTCGTTTAAAGattttttcaccaaatgttcttGATATCACACTCGTTGATCTTCCTGGCATAACAAAGGTTCCTGTTGGTGATCAGCCTTCTGATATTGAAAACCGAATCAGAACAATGATCATGTCATACATCAAAGCTCCCACCTGTCTCATTCTAGCTGTCACACCAGCAAATTCGGATTTGGCCAATTCAGATGCTCTTCAGATGGCAGGAATTGCTGATCCTGATGGTAATAGAACGATAGGTGTAATCACAAAGTTGGATATCATGGACAGAGGTACTGATGCCCGGAATCTGTTACTTGGAAAAGTTATTCCCCTCCGTCTCGGTTATGTGGGTGTTGTTAATCGTTGTCAGGAGGATATTCGTGAGAATAAGAGTATAAAAGATGCTCTTGTTGCAGAAGAGAAATTCTTCCACAGTCGTCCAGAATACAATAGCGTTGCAGATAGTTGTGGTGTTCCTCAGCTGGCAAAGAAGTTGAACCAGATTCTTGCACAACATATCAAGAATGTGCTCCCTGGGTTGAGAGCACATATAAGCAGATTATTGGTTTCTGCTGCAAAGGAGCAGGCAAGCTATGGAGAAATCACTGAGTCCAAGGCATGTGAAGTTGATCCATGTGAGGACTTGACTGATGATGATATTCGAACTGCCATACAAAATGCAACTGGGCCTAGATCAGCATTGTTTGTTCCAGAAGTTGATAACTCGTCTATTGGATCCAAGCCTTCAATGCGCAAGATCAGCCATCGCTGTATGGTGGGTGAGTCGCAGAGGTTCCCTTTTTTAAGAAAGTGTATGGATGAAGTTGCAGGGACCTTTCTGCGAGAAGGTCTTGAACCCTCAGAGTTTATGATTAGGCACATTATCGAAATGGAGTTGGACTACATTAACACTTCCCACCCAAATTTTGTTGGTGGAGCTAAGGCACTAGAGATTGCTGTGCAACAGGCCAGAACTTCTAGGATTTCCCTCTCAGTTTCTAGGCAGAAGGATGGTATGGAAACTGATAAGGGATCTGCCTCTGAAAGGAGTGTTAAGTCTCGAGCTATTCTTGCAAGGCAAGTGAATGGAGTAGTGGCTGATCAGGTTGTTCGTCCTGCGTCGGATATTGAAAAGGCTGCACCCTCTGgaAATACTGGTGGAAAAAGTTGGGGTATTTCATCCATTTTTGGTGTAGCTGATAGCCGTGTATCTGTGAAAGAGAGTACAGCAAGTAATACATATAGTGAAACAGTTCACAATATGGAACAGTCCTCTATGATACATTTGAGAGAGCCCCCTCCTATCTTACGGCCATCTGAGAGCAATTCAGACACAGAAGCTATTGAAATTGCAGTCACTAAATTGCTTTTGAGATCATACTATGATATAGTTAGAAAGAATGTTGAAGACTTCGTACCTAAAGCAATTATGCACTTCTTGCTCACATTTATTTCATCTGTTGGAATCAGAGTAAACAACACAAAACGGCACCTGCACAATGTGTTCATTCAAAAGCTTTACAGAGAGAACCTGTTTGAGGAGTTGTTGCAAGAACCTGATGAGGTGGCTCAGAAAAGAAAACACTGTCAAGAAATGCTCCGAATTTATCGACAAGCTTTTCATGAATTGGATGATCTACCTATGGAAGCTGAAGCAGTTGAAAGAGGAGGATACAGTACGTCCGAACCCACTGGTTTGCCAAAAATTCATGGAACTTCATCCATGTATTCTACAACTAGTTCTGCTGATTACTATGCGAATTCTCCAAAGCACACTAAGTCGAGAAAGTCTTCTCACTCTGGGGAGCTTCATTCTCCATTCCATGCTTATTCAGACTTCAATGGAAATGGAACGCAATAG 3366 0.4376 MGTMNRQPLQARAFEDREQQVVQVPMQVDDFEGGLNAQCDGVEEARVSSGLSGTNCCALQSRTSELTISFEGEVYVFPAVTPEKVRFLCSLFDFSSKLIIRIDFEESVQVFCSNCDDKTTYSDLCIHNEVQAVLLLLGGRELPSPCSVPSTEFLLQQNCQNMRGINDTSRGSKLSRRFASLVRFREKRKERCFEKKIRYSCRKEVAQRMHRKNGQFASVKECYSSVAENWDSSNGAPCSESTERRCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKTGKITSFEQNELDTSAEMKPSTTKPENACPDQNDAESPEETKPLPVDSRQSPKKINEQYTLETAEAVTDNLSIQVENLDVNLHEQDTLEDLADASGTDFDIPSGFDEQDIFAKVGSQTTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLVQTKRKPDGTAEEYGEFLHLNGKRFYDFSEIRREIQAETEREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSDIENRIRTMIMSYIKAPTCLILAVTPANSDLANSDALQMAGIADPDGNRTIGVITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRCQEDIRENKSIKDALVAEEKFFHSRPEYNSVADSCGVPQLAKKLNQILAQHIKNVLPGLRAHISRLLVSAAKEQASYGEITESKACEVDPCEDLTDDDIRTAIQNATGPRSALFVPEVDNSSIGSKPSMRKISHRCMVGESQRFPFLRKCMDEVAGTFLREGLEPSEFMIRHIIEMELDYINTSHPNFVGGAKALEIAVQQARTSRISLSVSRQKDGMETDKGSASERSVKSRAILARQVNGVVADQVVRPASDIEKAAPSGNTGGKSWGISSIFGVADSRVSVKESTASNTYSETVHNMEQSSMIHLREPPPILRPSESNSDTEAIEIAVTKLLLRSYYDIVRKNVEDFVPKAIMHFLLTFISSVGIRVNNTKRHLHNVFIQKLYRENLFEELLQEPDEVAQKRKHCQEMLRIYRQAFHELDDLPMEAEAVERGGYSTSEPTGLPKIHGTSSMYSTTSSADYYANSPKHTKSRKSSHSGELHSPFHAYSDFNGNGTQ 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2791 1121 CDD DLP_1 408 680 IPR001401 GO:0003924|GO:0005525
Sto2g2791 1121 ProSiteProfiles CCT domain profile. 177 219 IPR010402 GO:0005515
Sto2g2791 1121 SMART dynamin_3 385 632 IPR001401 GO:0003924|GO:0005525
Sto2g2791 1121 MobiDBLite consensus disorder prediction 832 853 - -
Sto2g2791 1121 Gene3D Dynamin, middle domain 900 1028 - -
Sto2g2791 1121 Gene3D Dynamin, middle domain 751 851 - -
Sto2g2791 1121 Gene3D - 238 299 IPR013088 GO:0006355|GO:0008270
Sto2g2791 1121 Pfam Dynamin GTPase effector domain 948 1047 IPR003130 GO:0003924|GO:0005525
Sto2g2791 1121 SMART GED_2 947 1048 IPR003130 GO:0003924|GO:0005525
Sto2g2791 1121 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 407 680 IPR030381 GO:0005525
Sto2g2791 1121 Pfam CCT motif 177 219 IPR010402 GO:0005515
Sto2g2791 1121 Pfam Dynamin family 413 592 IPR045063 -
Sto2g2791 1121 MobiDBLite consensus disorder prediction 1056 1121 - -
Sto2g2791 1121 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 436 445 IPR019762 -
Sto2g2791 1121 SMART GATA_3 240 293 IPR000679 GO:0006355|GO:0043565
Sto2g2791 1121 MobiDBLite consensus disorder prediction 294 341 - -
Sto2g2791 1121 Gene3D - 394 720 IPR027417 -
Sto2g2791 1121 Pfam GATA zinc finger 246 282 IPR000679 GO:0006355|GO:0043565
Sto2g2791 1121 MobiDBLite consensus disorder prediction 294 318 - -
Sto2g2791 1121 PANTHER DYNAMIN 3A-LIKE PROTEIN 710 1073 - -
Sto2g2791 1121 PANTHER DYNAMIN 3A-LIKE PROTEIN 396 708 - -
Sto2g2791 1121 Pfam Dynamin central region 752 818 IPR000375 -
Sto2g2791 1121 Pfam Dynamin central region 601 706 IPR000375 -
Sto2g2791 1121 ProSiteProfiles GATA-type zinc finger domain profile. 240 296 IPR000679 GO:0006355|GO:0043565
Sto2g2791 1121 ProSitePatterns GATA-type zinc finger domain. 246 273 IPR000679 GO:0006355|GO:0043565
Sto2g2791 1121 ProSiteProfiles GED domain profile. 952 1053 IPR020850 -
Sto2g2791 1121 PANTHER DYNAMIN 396 708 IPR022812 -
Sto2g2791 1121 PANTHER DYNAMIN 710 1073 IPR022812 -
Sto2g2791 1121 Pfam tify domain 61 86 IPR010399 -
Sto2g2791 1121 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Sto2g2791 1121 CDD ZnF_GATA 245 288 IPR000679 GO:0006355|GO:0043565
Sto2g2791 1121 PRINTS Dynamin signature 410 428 IPR022812 -
Sto2g2791 1121 PRINTS Dynamin signature 435 452 IPR022812 -
Sto2g2791 1121 PRINTS Dynamin signature 512 529 IPR022812 -
Sto2g2791 1121 PRINTS Dynamin signature 562 580 IPR022812 -
Sto2g2791 1121 PRINTS Dynamin signature 581 597 IPR022812 -
Sto2g2791 1121 PRINTS Dynamin signature 604 623 IPR022812 -
Sto2g2791 1121 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 242 296 - -
Sto2g2791 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 687 IPR027417 -
Sto2g2791 1121 MobiDBLite consensus disorder prediction 1067 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2791 Sto-Chr2 41502021 41516363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2791 65 294 Tify Gene Family AT1G51600 45.378 4.93e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto2g2791 Dynamin_N 6.4e-54 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2791 K17065 - gmx:100795026 1095.11