Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2781 ATGCTCCGCAAGGAAGAAGCCAATAAGCTACAAGAACTGAGgCAGTTGAAGGGGGAAGAGCTTGAAGGATTGGATACAAATGAATTACAGAAGCTAGAGGAAGTACTTGAAACAGGTTTGAGCCGAGTTGCCAAAGCAAAGgATGAAATAATCATGAAAGAGATAAGTGAGCTCAAGAGGAAGCAAGCTCAGCTGATAGAAGAGAACAAGCGATTGAAACAGGTAAAAAGCCATACATATGAACAAGGTCAGTCATCTGAGTCAGCCATTATATGTAGCACATCTGATCCTCCTCATGACTCTGATAGTTCAGACACCTCTCTCAGATTGGGgtaa 336 0.4167 MLRKEEANKLQELRQLKGEELEGLDTNELQKLEEVLETGLSRVAKAKDEIIMKEISELKRKQAQLIEENKRLKQVKSHTYEQGQSSESAIICSTSDPPHDSDSSDTSLRLG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2781 111 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 111 - -
Sto2g2781 111 MobiDBLite consensus disorder prediction 74 111 - -
Sto2g2781 111 PANTHER - 1 111 - -
Sto2g2781 111 Coils Coil 29 49 - -
Sto2g2781 111 MobiDBLite consensus disorder prediction 78 111 - -
Sto2g2781 111 ProSiteProfiles K-box domain profile. 1 83 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto2g2781 111 Coils Coil 55 78 - -
Sto2g2781 111 Pfam K-box region 2 74 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sto2g2781 111 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2781 Sto-Chr2 41417676 41420150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2781 2 111 MADS-box Gene Family AT2G22540 47.482 8.46e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2781 - - qsu:111985104 118.627