Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2777 ATGTCGTTGGTAATGCCGGTTGGACTGAAGTTCCTTCCTACTGATGCAGAGCTAGTTGGGTGTTACCTATACAAGAAGGTCACAGGGATGGCACTaccaaacggtgtcgttttcGAGTGCGATCTTTACGGTAAAGAGAATCCATGGGAGATATGGGAACGATATAAGCAGAATGTGGTTAAATGCGTTGAGGGAGAAGATCTTTATTTCTTCACAAAGCTCAAGAAGAAGAGCCCAAAGGCAAAGAGGATTGAAAGGAGGATCGGCATTGGAAGATGCATGGGAGGGAGAAAGTGGTGA 300 0.4267 MSLVMPVGLKFLPTDAELVGCYLYKKVTGMALPNGVVFECDLYGKENPWEIWERYKQNVVKCVEGEDLYFFTKLKKKSPKAKRIERRIGIGRCMGGRKW 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2777 99 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 91 - -
Sto2g2777 99 Pfam No apical meristem (NAM) protein 6 88 IPR003441 GO:0003677|GO:0006355
Sto2g2777 99 ProSiteProfiles NAC domain profile. 5 99 IPR003441 GO:0003677|GO:0006355
Sto2g2777 99 SUPERFAMILY NAC domain 3 91 IPR036093 GO:0003677|GO:0006355
Sto2g2777 99 Gene3D NAC domain 14 98 IPR036093 GO:0003677|GO:0006355
Sto2g2777 99 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2777 Sto-Chr2 41387366 41387665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2777 1 91 NAC Transcription Factor Family AT1G71930 38.462 9.83e-13 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto2g2777 NAM 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2777 - - pvy:116124271 93.2041