Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2754 ATGGGTGGTGTGGAGATTGAAACGACGACGTTAGATGTGGAAGCCTTGagtgatgaaagaaagaagaagaatggagagATGGGAATATGTTTGACATGGAAGGATTTGTGGGTGAAAGCTTCAagtgggaagaagaagaatggaagcACAACAATCCTTGGGGGTCTCACTGGCTATGCAAAGCCAGGGCAGCTCTTAGCCATAATGGGACCTTCTGGTTCTGGCAAATCCACTCTTCTTGATGCATTAGCAGGGAGATTAAGCTCAAACACAATGCAAACAGGGGAGATTCTCATCAATGGTCACAAACAAGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGATGATACTCTATACACAACCTTGACTGTAAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAATTACCGGATTCAATGTCAaagcaagagaagaaggaaagagCAGAACTCACAATAAGAGAAATGGGTCTTCAAGATGCAATGAACACAAGAATTGGAGGAGGATGGGGAAGTAAGGGAATAAGTGGTGGCCAAAAGAGAAGAGTTAGTATTTGCATTGAGATCCTCACACGTCCAAGGCTTCTGTTTCTTGATGAGCCAACTAGTGGGCTTGATAGTGCAGCTTCATACTATGTTATGAGAGCAATTGCTAGCCTTGATCACAAAGATGGGATTCAGAGAACTATTATTGCATCAATTCATCAACCTAGTAGTGATGTTTTCCAGCTGTTTCATAATCTTTGCCTTCTTTCTTCTGGTACAACTGTGTACTTTGGCCCTGCTTCGTCTGCAAGTGAGTTGTTTGCTTCAAATGGGTTTCCTTGTCCTACTCTTCAGAATCCTTCTGATCATTACTTAAAAACTATAAACAAGGATTTTGATCagGACATTGAACAAGATATATCCGCAGGAACTCAAAGAATACCCACAGAAGAAGCAATTCATATTCTAGTGAATTCATTCAAATCATCTGAAATGAACCAACAAGTTCAAGCCCAAGTAGCACTTCTATCTgcaaagGAAAGCAGTtcaatggagaagaagaggaaagGGCATGCTGGGTTCTTTACTCAATGTGTTGTTCTTACGAAAAGATCATCAGTGAACATGTGTCGTGATTTAGGCTATTATTGGTTACGTTTGCTCATATATATGGCTCTGGCTCTAAGTTTGGCTACTGTCTTTCATAATCTAGGAACAACTTATGGATCTATTCAGGATAGGGGCTCATTTCTGGCTTTTGTTTCTTCATTCTTTACTTTCATGGCTATTGGTGGATTCCCTTCCTTTGTGGAGGACTTGaagGTGTTTGAAAGGGAAAGGCTAAATGGGCATTATGGAGTGACAGCATATGTAATTGGAAACACCTTGTCTTCAATCCCATATCTATTACTAGTGTCCTTCATTCCTGGGGCAATATCCTATTACCTCCCTGGCCTTCAGAGATCACTTCCCCACTTCTTCTACTTTTGCTGTGTCCTATTCTCATGCCTAATGCCAGTAGAAGGCCTTATGATGATTGTGGCTAGCATTGTCCCTAACTTCCTTATGGGCATATTACTGTATCCTACGTACTATCTTGCCTTCCATAGATATGCCTACCAAGGATTGTACAAGAATGAGTATGAAGGACTGAATTTTGCTGGTGATGATCATAGCTCATCGAAAAGTGTCAGTGGTGAAGAGGTTTTGAGGAGTAAATGGGAAGTTGATATGAGGTATTCAAAGTGGGTTGATGTTGGAATTATGTTAGGGATGATTGTGTTGTATAGAGTTATCTTCTTGGTCATCATTAAGAGTATTGAGAAGGTGAAGCCTTTGGTTGCTAATTCGCTGCGTTTTGTGCATCCTAAAAGGGCCATGCAAGTCATGGGAGAATTAAACCTAATGCTAATCCTTTACATgtgtatttaa 1923 0.3853 MGGVEIETTTLDVEALSDERKKKNGEMGICLTWKDLWVKASSGKKKNGSTTILGGLTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLSSNTMQTGEILINGHKQALAYGTSAYVTQDDTLYTTLTVREAVYYSAQLQLPDSMSKQEKKERAELTIREMGLQDAMNTRIGGGWGSKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMRAIASLDHKDGIQRTIIASIHQPSSDVFQLFHNLCLLSSGTTVYFGPASSASELFASNGFPCPTLQNPSDHYLKTINKDFDQDIEQDISAGTQRIPTEEAIHILVNSFKSSEMNQQVQAQVALLSAKESSSMEKKRKGHAGFFTQCVVLTKRSSVNMCRDLGYYWLRLLIYMALALSLATVFHNLGTTYGSIQDRGSFLAFVSSFFTFMAIGGFPSFVEDLKVFERERLNGHYGVTAYVIGNTLSSIPYLLLVSFIPGAISYYLPGLQRSLPHFFYFCCVLFSCLMPVEGLMMIVASIVPNFLMGILLYPTYYLAFHRYAYQGLYKNEYEGLNFAGDDHSSSKSVSGEEVLRSKWEVDMRYSKWVDVGIMLGMIVLYRVIFLVIIKSIEKVKPLVANSLRFVHPKRAMQVMGELNLMLILYMCI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2754 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 267 IPR027417 -
Sto2g2754 640 Pfam ABC transporter 58 205 IPR003439 GO:0005524
Sto2g2754 640 Pfam ABC-2 type transporter 237 352 IPR043926 GO:0140359
Sto2g2754 640 Pfam ABC-2 type transporter 360 531 IPR013525 GO:0016020|GO:0140359
Sto2g2754 640 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 3 523 - -
Sto2g2754 640 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 524 631 - -
Sto2g2754 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 523 - -
Sto2g2754 640 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 524 631 - -
Sto2g2754 640 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Sto2g2754 640 SMART AAA_5 62 252 IPR003593 -
Sto2g2754 640 Gene3D - 34 274 IPR027417 -
Sto2g2754 640 CDD ABCG_EPDR 28 262 - -
Sto2g2754 640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 280 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2754 Sto-Chr2 41227731 41231785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2754 63 219 Calmodulin-binding Proteins AT2G36910 30.539 6.64e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2754 K05681 - gmx:100794527 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2754 2 41227731 41231785 Sto2g2754 2 41227731 41231785 ECH