Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2751 ATGGAAAACCACGACGTTGATATGCAGGGAACAGAGAACAACGAAGCAGATTTGGATGACATGAAGAAGCGATTAAAGGAAATGGAAGATGAAGCTGCTGCTTTGCGAGAGATGCAGGCAAAGGTTGCCAAGGATATGGGATCTGTGCAAggtgattctttttcttttctttttttagttttattaattttaaatctaGAGTTTTTGCTGATAATTTTCACTCTTCTCGTGGATTCTAGACTTCTagATTCTGCTACTGCTGCTGCAAGTCAAGCCAGTAAGGAAGAAATAGATTCCCGGTCAGTCTTTGTGGGCAACACCTGGTTTGATTTGAGCTTGATTTCCTATCTCTCAAAGCTCTCGCATTGTATCACGGAACCGAATTTGGACAtcataaaaGTAGACTATTCTTGTACTCCGGAGGAAGTGCAGCAGCATTTCCAATCATGTGGAACTGTAAACAGAATCACCATTCGCACTGACAAGTTTGGCCAACCCAAGGGTTATGCCTATGTGGAGTTCCTTGAAGCAGAGGCTGTTCAAGAGGCTCTTCTGCTTAATGAATCTGAATTACATGGACGCCAATTGAAGCGGACCAACCTACCTGGGATGAAGCAGCATCGCCCCCGACGGTCCAACCCATATATGGGATTTCATGGCAGAATTCCATATGCCCCTCCTTTTGCCTATTCTCCATATGGATATGGAAAGTTCCCAAGGTTCAGAGCGCCAATGCGCTACACCCCCTACTATTGA 756 0.4259 MENHDVDMQGTENNEADLDDMKKRLKEMEDEAAALREMQAKVAKDMGSVQGDSFSFLFLVLLILNLEFLLIIFTLLVDSRLLDSATAAASQASKEEIDSRSVFVGNTWFDLSLISYLSKLSHCITEPNLDIIKVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEAEAVQEALLLNESELHGRQLKRTNLPGMKQHRPRRSNPYMGFHGRIPYAPPFAYSPYGYGKFPRFRAPMRYTPYY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2751 251 Gene3D - 80 197 IPR012677 -
Sto2g2751 251 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 100 197 IPR000504 GO:0003723
Sto2g2751 251 Coils Coil 8 45 - -
Sto2g2751 251 PANTHER - 4 50 - -
Sto2g2751 251 PANTHER - 132 248 - -
Sto2g2751 251 SUPERFAMILY RNA-binding domain, RBD 134 209 IPR035979 GO:0003676
Sto2g2751 251 SMART rrm1_1 128 199 IPR000504 GO:0003723
Sto2g2751 251 CDD RRM_II_PABPs 101 197 - -
Sto2g2751 251 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 134 197 IPR000504 GO:0003723
Sto2g2751 251 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 132 248 - -
Sto2g2751 251 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 4 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2751 Sto-Chr2 41210864 41214388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2751 128 196 Eukaryotic Initiation Factors Gene Family AT2G36660 30.000 8.85e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2751 K14396 - mnt:21400190 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2751 2 41210864 41214388 Sto2g2751 2 41210864 41214388 ECH