LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g2741	ATGGCGGAGCGAGCTTCTTATGGAGTTGGTCCTCGATTAGTCCATTCTGAGGTTGAGAAAACTGAGGATAATCCAGATGGGTTTTCAAATCTTCTaaataaaatatttaaccaaATGATTGATGCCCAAATTGCAGATCTTCAACAGTTACAATATGAAGCCCAGCATCGGTGGTTGAGGCCTGCtgaaatttgtgaaattcttcGTAATTATCGGATGTTTCATATCACACCAGAACCTCCAAACAGGCCTCCAAGTGgttcactttttctttttgatcgGAAGGTGTTGAGATATTTTAGAAAGGATGGACATAATTGGCGGAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCCCAtggagaagaaaatgaaaattttcagaGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCACATAGTTTTTGTCCACTACTTGGAGGTTaagGGTAACAAAACAAACATTGGAGGAAACACAGACAATGACGAGGTTACATCAGATTCCCAAAAAAGCAGATCTCCATCATCTTCTTTTCCTACAAATTATAGTAATGTGCCTTCAAGAAGTACAGATGCCATGAGCCCAACTAGCACTTTATCTTCCTTGTGTGAGGATGCTGATTCAGGTGATCATGGACAGTCATCAAATTCTGGAACAAATTATATCCCACTTGTTCCGGGAGATAATTCTAGAAGCAACACTTCTTTCATTGAGGGGCAAAATATGCATGGCATGGGCTCCTGGGGCAATGTCTTAGATCAATGTACTGCTGGACTACCTGCTGATCCTTCTGTTGTATCATTTCCTTCCATCCCATCTTCAATAGGAAACATCCTTGAACAAGACCATTCTGTTCTGGGTGACCTTTTTGCAGGCAAGGGCACGCTCACTGAGGAGGCAGGGACATCTCAATCTCTCCAATCAAATTGGCAGATTCCTTTCGAGGACAATTCAGGACAGCTAAACAAATGGCCGATAACCCAATTGTTGAGTTCTGAATTTGGATCTGATTTTAGCACTGGTTTACTACAGCATGAATCTCATAATGCAAATCCTGAAATTGCTCCAGACCTATTAACGTTCAATGGCCAGCTAAGGGAGCAGCCTGTACAGGAAAACCTTTCAAAACAGTATACAGATGGACAATCTCAATTGTCTTTGAGATCTAATTCTGAAAGTGAAGTTCCTTCGGAAGAAAGTATTAACTATGCGTTTACTATGAAACGCACATTGTTAGATGGAGAGGATAGCCTGAAGAAAGTTGATAGTTTCTCTCGGTGGATTAGTAAAGAACTTGGAGAGGTGGCTGATCTGCATATGCAATCTTCACCTGGTATTTCATGGAGCACAGATGAAAGTGGGCAAGTTATAGATGATTCTTCACTGAGTCCCTCCCTTTCTCATGATCAGCTGTTTAGCATATATGAATTTTCACCTAAATGGGCTTATGCTGAATCTGAAACTGAGGTGTTGATTATTGGAACATTTCTGAAGAGTCAACCAGAGGTGGCAAACTGTAACTGGTCTTGTATGTTTGGGGAAGTTGAGGTTCCAGCTGAGGTTCTAGCCAATGGAATTCTGTGCTGTCATGCTCCACCTCATAAGAATGGAAGAGTCCCCTTCTATGTAACACGGTCCAATAGGCTTGCATGTAGTGAAGTGAGGGAATTTGATTACAGAGAGGGATTTGTCAAAGATGTAGAGGTTGAAGAATTTTGCAGCAATTCATTTGAAATGCTGCTTCATTTGCGGTTTGAAGATTTACTTTCTTTGAAATCAGTACACCCTTCAAATGGCAAGTCATGTGACAGTGATACAGACAAAAGGAGCTTGATTTATAAGCTTATTTCATTAAAGGAGGAAGAGGAGTATTCAAATAAGGAAGATCCGACTTTAGACACAGATTTGTCCCAACACAAGGAGCATCTATTTCACAGGCAGGCTAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAGCTGAAGATGGTACAGGGCCAAATATATTAGATGAGGAGGGACAAGGTGTGCTACATTTAGCAGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTATAATTTCTGGAGTTAATATTAATTTCCGGGATGTGAATGGATGGACAGCTTTGCATTGGGCTGCCTCCTGTGGCAGAGAGCGGACAGTTGCTCTCCTTCTCTACATGGGTGCAGCCCCTGGTGCAGTGACAGATCCATCTCCAGCATTTCCTGCAGGTAGAACACCTGCAGATCTTGCTTCAAGCAATGGACACAAGGGTATCTCAGGTTTTCTTGCAGAATCTTCATTAACTAGCCATCTTGCATCCCTCACAATGGATGATCTAAAGGAAGGTGGTGGTCTAGAAGGTTCAGGAATGAAAGCAGTACAGACAGTTTCAGAACGTTCTGCGACACCTGTGTTTTGTGGTGATATCCCAGAGACCCTCTGCCTTAAGGATTCTCTTACTGCTGTTCGTAACGCTACACAAGCTGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTCCATAGGAAGCAATTAGCTGAGTATGAAGATGATGAGTTAGATCAGCGAGCTCTTTCCCTTCTCGCTTCTAAGGCTAGCAAGGCTGGACAGGGAGATGGATTAGCTCATGCTGCTGCAACACAAATACAGAAAAACTCATATTGGCCGAAGGAGCTTATCAGGGTCAATGAATTTCTAACATCAGTTGCATTATTGATCTTGGCAGTGGCTCATGTAAGAGGGCACCAGGTAAGAAAGCAGTATAAATCAATCATCTGGTCCGTAGGGATACTGGAGAAGGTCATATTGCGTTGGAGACGCAAGGGCAGTGGTTTACGTGGATTTCGACCTGATGCTGTTACCAAGGATCCCAGCCCACAAAGTGAACCCTTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAGAGTGAGGAAAGGTTTCAAAAGGCCCTTTCAAGGGTCAAGTCCATGGTTCAATATCCTGAGGCGCGGGCCCAATACAGGCGGCTGCTAAATGTTGTCGAGGACTTTCGTCAGACCAAGGCATGCAATATGGACTTGACCAATTCGGAAGAGACTGTTGATGGTGTAGAGCAGCTGATTGATATTGACATGCTTTTAGATGATGACAATTTCATACCCATTGCATTTAATTGA	3234	0.4181	MAERASYGVGPRLVHSEVEKTEDNPDGFSNLLNKIFNQMIDAQIADLQQLQYEAQHRWLRPAEICEILRNYRMFHITPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTNIGGNTDNDEVTSDSQKSRSPSSSFPTNYSNVPSRSTDAMSPTSTLSSLCEDADSGDHGQSSNSGTNYIPLVPGDNSRSNTSFIEGQNMHGMGSWGNVLDQCTAGLPADPSVVSFPSIPSSIGNILEQDHSVLGDLFAGKGTLTEEAGTSQSLQSNWQIPFEDNSGQLNKWPITQLLSSEFGSDFSTGLLQHESHNANPEIAPDLLTFNGQLREQPVQENLSKQYTDGQSQLSLRSNSESEVPSEESINYAFTMKRTLLDGEDSLKKVDSFSRWISKELGEVADLHMQSSPGISWSTDESGQVIDDSSLSPSLSHDQLFSIYEFSPKWAYAESETEVLIIGTFLKSQPEVANCNWSCMFGEVEVPAEVLANGILCCHAPPHKNGRVPFYVTRSNRLACSEVREFDYREGFVKDVEVEEFCSNSFEMLLHLRFEDLLSLKSVHPSNGKSCDSDTDKRSLIYKLISLKEEEEYSNKEDPTLDTDLSQHKEHLFHRQAKEKLYSWLLHKVAEDGTGPNILDEEGQGVLHLAAALGYDWAIAPIIISGVNINFRDVNGWTALHWAASCGRERTVALLLYMGAAPGAVTDPSPAFPAGRTPADLASSNGHKGISGFLAESSLTSHLASLTMDDLKEGGGLEGSGMKAVQTVSERSATPVFCGDIPETLCLKDSLTAVRNATQAADRIHQVFRMQSFHRKQLAEYEDDELDQRALSLLASKASKAGQGDGLAHAAATQIQKNSYWPKELIRVNEFLTSVALLILAVAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAVTKDPSPQSEPLKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACNMDLTNSEETVDGVEQLIDIDMLLDDDNFIPIAFN	1077

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g2741	1077	Pfam	Ankyrin repeats (3 copies)	671	751	IPR002110	GO:0005515
	Sto2g2741	1077	Gene3D	-	628	781	IPR036770	-
	Sto2g2741	1077	ProSiteProfiles	Ankyrin repeat profile.	725	757	IPR002110	GO:0005515
	Sto2g2741	1077	MobiDBLite	consensus disorder prediction	395	414	-	-
	Sto2g2741	1077	SMART	CG_1_2	50	168	IPR005559	GO:0003677
	Sto2g2741	1077	PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1	40	234	-	-
	Sto2g2741	1077	PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1	227	1077	-	-
	Sto2g2741	1077	Pfam	IPT/TIG domain	493	571	IPR002909	-
	Sto2g2741	1077	SUPERFAMILY	Ankyrin repeat	680	786	IPR036770	-
	Sto2g2741	1077	Pfam	CG-1 domain	53	166	IPR005559	GO:0003677
	Sto2g2741	1077	ProSiteProfiles	CG-1 DNA-binding domain profile.	47	173	IPR005559	GO:0003677
	Sto2g2741	1077	PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	40	234	-	-
	Sto2g2741	1077	PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	227	1077	-	-
	Sto2g2741	1077	ProSiteProfiles	Ankyrin repeat region circular profile.	725	750	-	-
	Sto2g2741	1077	Gene3D	Immunoglobulins	486	581	IPR013783	-
	Sto2g2741	1077	SMART	ANK_2a	725	754	IPR002110	GO:0005515
	Sto2g2741	1077	SMART	ANK_2a	764	793	IPR002110	GO:0005515
	Sto2g2741	1077	SUPERFAMILY	E set domains	493	579	IPR014756	-
	Sto2g2741	1077	MobiDBLite	consensus disorder prediction	173	253	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g2741	Sto-Chr2	41140537	41150175	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g2741	1	1058	CAMTA Transcription Factor Family	AT5G64220	51.273	0.0	993

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g2741	K21596		-	gmx:100818124	1437.94