Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2712 ATGGCGCCGAGTAACAAAAACCTACAGCTTACTTCCATctcctccgccgccgccgccggtgATGGCGGCGGTGAACTGGAGGACGTGCGGCTTTTGGACTCGTATGATAATCGAAACTGCAATGATGTTACCGATGGAATCGAGGAAGGTTTGAAGCGGATTCATGTGAGAGTCACCGGCATGACCTGCGCTGCTTGCTCTAATTCCGTCGAAGAAGCTTTGAAGGCCGTCGATGGCGTTGTTAGCGCCTCCGTGGCTCTGCTTCAGAACAAGGCTGACGTGGTTTACAATCCGACTCTTGTTAAGGATGTAGACATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGACGTATTACCTGAACCCAGTACAATTGGAACAAAGCCACATGGAACCCTGGTGGGGCAGTTCACAATTGGGGGTATGACATGTGCTGCCTGTGTAAATTCTGTTGAAGATATTTTAAGAAATCTTCCAGGGGTCAAAAGGGCTGTGGTAGCTTTGGCTACTTCCTTAGGAGAAGTTGAATATGATCCTAAAGTAATTAGTAAAGATGATATTGTCTGTGCTATTGAAGATGCTGGTTTTGAAGCTTCATTTGTACAGAGCAGTGAGCaggataaaataattttgtgggTTGTTGGTGTACACACACTGATTGATGCACAAGTCTTAGAGGGCATCCTCAGCAACATGAAAGGAGTAAGGCAGTTTCGTTTTGACCGGATATCAAGTGAATTGGAAATTCTTTTTGATCCTGAAGTTTTCAGCTCTAGATCATTAGTTGATGAGATTGAGGGAGTAAGTAATGGCAAGTTTAAAATACATGTTAGAAGCCCTTATACAAGAATGACTTCCAAAGATGTTGAAGAGACCTCAGCTATGTTTCGGCTATTTATCTCCAGTCTGTCTCTTAGTATTCCTCTCTTCTTCATACGGGTAGTTTGCCCTCATATACCACTGGTATATTCCTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGGTGATTGGCTGAAGTGGGCATTAGTGAGTGTAATCCAATTTGTAATTGGGAAGCGCTTCTACGTTGCAGCTGGCAGAGCTCTTAGAAATGGTTCAACTAACATGGATGTCTTGGTTGCTTTGGGAACTACAGCATCTTATGTCTATTCTGTTTGTGCTCTTCTATACGGTGCTCTTACTGGATTTTGGTCTCCAACATATTTTGAGACAAGTGCCATGCTCATAACATTTGTATTGTTAGGCAAGTATTTGGAATGCCTTGCTAAGGGAAAGACATCAGATGCTATCAAGAAGCTAGTAGAACTTGCTCCTGCAACAGCTTTGTTGGTTGTCAAAGATAAAGATGGAAGACCTGTTCAAGAGAGGGAAATAGATTCTTTGCTCATTCAACCTGGTGACACGTTAAAAGTTCAACCTGGTACAAAGATTCCTGCTGATGGCATCGTTGTTTGGGGCTCAAGTTACATAAATGAGAGCATGGTCACAGGTGAATCTGTTCCTGTTTTAAAGGAGGTGGATGCAACTGTTATTGGAGGTACAATAAATTTACATGGTGCCCTTCTCATTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAAATAATTAGCTTGGTTGAGACAGCTCAGATGTCCAAAGCCCCCATTCAGAAATTTGCGGACTATGTAGCAAGCATATTTGTTCCCACAGTAGTTTCTTTGGCACTATTGACATTATTGAGTTGGTATATTGCTGGGGCTTTAGGAGCTTACCCTGAAGAATGGCTGCCAGAAAATGGAAATCATTTTGTTTTTGCCCTTATGTTTTCAATATCTGTAGTGGTGATTGCTTGCCCCTGTGCACTTGGCTTGGCAACACCAACAGCTGTCATGGTAGCAACAGGGGTTGGGGCTAACAATGGAGTGTTGATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGTACTTTAACTCAGGGAAAAGCCACTTTCACTACAGCCAAGGTATTCACTGGAATGGACCGTGGAGAATTTCTAAAATTGGTGGCTTCTGCAGAGGCAAGCAGTGAACATCCATTGGCGAAAGCCATAGTAGCATATGCAcgacattttcatttctttgaTGAGTCGTCTGCAACTACTGGTATAAAAGATGATGCCAATGAGTTGAAGTCTGGATGGCTTTATGATGTCTCAGACTTCTCAGCTCTTCCAGGAAGTGGTGTTCAGTGTTTTATAGATGGGAAGCGTATTTTGGTGTTTCCTGTACAGATTGGTAATCGGAAACTAATGGTGGAAAGTGCCATTGATGTTTCAACAGAAGTGGAAAATTTTTTGGTAGAGCTGGAAGAAAATGCACAGACAGGGATACTAGTTGCATATGATGATAAGCTAACTGGAGTTATAGGGGTTGCAGACCCTCTAAAGAGAGAGGCTTCTGTTGTTATTGAGGGCCTTCAGAAAATGGGTATCAGGCCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGAGCTGTTGCCAAGGagGTTGGCATCCAAGATGTTCAGGCAGAAGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAGAAAGATGGAAGCATAGTTGCAATGGTGGGCGATGGTATCAACGACTCTCCTGCATTGGCTGCTGCCGATGTTGGTATCGCGATTGGAGCTGGGACAGATATTGCAATAGAATCTGCTGACTATGTGTTGATGAGAAACAGTCTGGAAGATGTAATCACAGCCATTGATCTCTCTAGAAAGACCTTTTCTCGTATCCGATTGAATTACATATTTGCAATGGCCTACAATGTGGTTGCTATACCAGTTGCTGCCGGGGTTCTCTATCCTTCACTAGGGATCAAGTTGCCACCATGGGTTGCTGGCACGTGTATGGCTCTCTCATCTGTAAGTGTTGTATGTTCTTCTTTGCTTCTCAGGAGATATAGAAGACCTAACCTTACTAAAATACTTGAAATCATTGTAGAGTag 3027 0.4205 MAPSNKNLQLTSISSAAAAGDGGGELEDVRLLDSYDNRNCNDVTDGIEEGLKRIHVRVTGMTCAACSNSVEEALKAVDGVVSASVALLQNKADVVYNPTLVKDVDIKNAIEDAGFEADVLPEPSTIGTKPHGTLVGQFTIGGMTCAACVNSVEDILRNLPGVKRAVVALATSLGEVEYDPKVISKDDIVCAIEDAGFEASFVQSSEQDKIILWVVGVHTLIDAQVLEGILSNMKGVRQFRFDRISSELEILFDPEVFSSRSLVDEIEGVSNGKFKIHVRSPYTRMTSKDVEETSAMFRLFISSLSLSIPLFFIRVVCPHIPLVYSLLLWRCGPFLMGDWLKWALVSVIQFVIGKRFYVAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKDGRPVQEREIDSLLIQPGDTLKVQPGTKIPADGIVVWGSSYINESMVTGESVPVLKEVDATVIGGTINLHGALLIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTLLSWYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKATFTTAKVFTGMDRGEFLKLVASAEASSEHPLAKAIVAYARHFHFFDESSATTGIKDDANELKSGWLYDVSDFSALPGSGVQCFIDGKRILVFPVQIGNRKLMVESAIDVSTEVENFLVELEENAQTGILVAYDDKLTGVIGVADPLKREASVVIEGLQKMGIRPVMVTGDNWRTARAVAKEVGIQDVQAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGIAIGAGTDIAIESADYVLMRNSLEDVITAIDLSRKTFSRIRLNYIFAMAYNVVAIPVAAGVLYPSLGIKLPPWVAGTCMALSSVSVVCSSLLLRRYRRPNLTKILEIIVE 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2712 1008 SUPERFAMILY HAD-like 656 988 IPR036412 -
Sto2g2712 1008 PANTHER HEAVY METAL P-TYPE ATPASE 16 1001 - -
Sto2g2712 1008 ProSitePatterns Heavy-metal-associated domain. 58 88 IPR017969 GO:0046872
Sto2g2712 1008 Gene3D - 425 547 - -
Sto2g2712 1008 ProSitePatterns Heavy-metal-associated domain. 140 169 IPR017969 GO:0046872
Sto2g2712 1008 CDD HMA 137 200 IPR006121 GO:0046872
Sto2g2712 1008 SUPERFAMILY HMA, heavy metal-associated domain 133 205 IPR036163 GO:0046872
Sto2g2712 1008 Pfam haloacid dehalogenase-like hydrolase 653 896 - -
Sto2g2712 1008 SUPERFAMILY Calcium ATPase, transduction domain A 456 543 IPR008250 -
Sto2g2712 1008 SUPERFAMILY Calcium ATPase, transmembrane domain M 394 964 IPR023298 -
Sto2g2712 1008 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 410 709 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto2g2712 1008 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 776 963 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto2g2712 1008 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 371 991 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto2g2712 1008 CDD P-type_ATPase_Cu-like 298 978 - -
Sto2g2712 1008 SUPERFAMILY HMA, heavy metal-associated domain 49 122 IPR036163 GO:0046872
Sto2g2712 1008 Pfam Heavy-metal-associated domain 56 116 IPR006121 GO:0046872
Sto2g2712 1008 Pfam Heavy-metal-associated domain 138 198 IPR006121 GO:0046872
Sto2g2712 1008 ProSiteProfiles Heavy-metal-associated domain profile. 135 201 IPR006121 GO:0046872
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 657 671 - -
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 807 818 - -
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 829 839 - -
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Sto2g2712 1008 PRINTS P-type cation-transporting ATPase superfamily signature 905 917 - -
Sto2g2712 1008 SFLD p-type atpase 639 934 IPR044492 -
Sto2g2712 1008 ProSitePatterns E1-E2 ATPases phosphorylation site. 659 665 IPR018303 -
Sto2g2712 1008 Gene3D - 136 201 - -
Sto2g2712 1008 Gene3D - 624 939 IPR023214 -
Sto2g2712 1008 PANTHER ATP7, ISOFORM B 16 1001 - -
Sto2g2712 1008 Gene3D - 51 122 - -
Sto2g2712 1008 TIGRFAM TIGR00003: copper ion binding protein 54 117 IPR006122 GO:0005507
Sto2g2712 1008 TIGRFAM TIGR00003: copper ion binding protein 137 199 IPR006122 GO:0005507
Sto2g2712 1008 Gene3D - 762 813 IPR023299 GO:0000166
Sto2g2712 1008 Gene3D - 664 761 IPR023299 GO:0000166
Sto2g2712 1008 SFLD C1.7: P-type atpase like 639 934 - -
Sto2g2712 1008 CDD HMA 56 117 IPR006121 GO:0046872
Sto2g2712 1008 PRINTS Copper-transporting ATPase 1 signature 53 78 - -
Sto2g2712 1008 PRINTS Copper-transporting ATPase 1 signature 79 102 - -
Sto2g2712 1008 PRINTS Copper-transporting ATPase 1 signature 108 128 - -
Sto2g2712 1008 Pfam E1-E2 ATPase 439 636 - -
Sto2g2712 1008 ProSiteProfiles Heavy-metal-associated domain profile. 53 119 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2712 Sto-Chr2 40814950 40821507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2712 1 1008 Primary Pumps ATPases AT5G44790 74.852 0.0 1510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2712 K17686 - gmx:100804960 1602.03