Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2691 ATGTATGAACATACGGCTTCGTTTGATCCTAACACAATGGCAGAAGCTGCTATTTCACGAAAAGACAGCTTTTCCGAAgcaccgccgccgccgctcATGGCTGCCGGAAACTCTACGAGCAGCATTAACAACGGCTTGGAAGAGAATCTCAACCTCTCTTATCACCATCACCACCATACACCGGTACCAGAAGTTGTCTCCGCCTTCGCTAATGGCGTCACCGCCGCATCGACGGACATCGTGTATCCTCAACATCTTGGTTTGAACGGCGCCGGAAACTCCTTCAACAACGAGAATTTAGGCACGCATTTGGTTCAAGAGGTCATCGACGTCCTCTCCAACGAGCAATCAAATTGGGACCCTACCGTTCAGGAATTGCAAGATTTATGTTATTCCAATACCAATCACGAACAACACCAACACCACCAACAACAATTTCAGCAAATTGAAACACAAAGTTACAACACTTCATCTTCCATTCTCGATACTCCTTCTTACTCTTCTTCGGATCTCCTGAACCTTCTCAATTTACCTAGATGCTCAGCTTCCTCTTTGCTCACAAGTCCAACCCAGAAGATTCCCAATTTTCCCAACTCCATGGGGTTTCTCGGAGACATTCCGATAGGTTCAGATAGCACAAGCACTTGTTCTGTGTTGTACGATCCTCTGTTTCATCTGAATCTGCCTCCACAACCTCCAGCTCTCAGAGAGCTGTTTCAGTCTCTGCCTCGTGGGTATAGCTTGCCAACGAGCTCAAGAAATGGCTCCATTTTTGGTGGTGCAGGGGATGAGATCATGGAAGGGAATGGGATTGTGTACCAAGATGGAGATGGGAGCCAGATGGATAATGGAGTTCTGGAATTCAACAGAGGGACTGCTTGTGTTGgcaaaggaagagaaggaaaaggCACTAAGCATTTTGCAACTGAGAAACAGAGAAGAGAACAGATGAATGACAAATACCAAGTCTTGAGGAGTCTCATCCCAAACCCCaccaagGCGGATAGAGCATCTGTAGTGGGAGATGCCATTGACTATATAAGAGAGCTGATTAGAACCGTGAATGAGCTGAAGTTGTTGGTGGAGAAGAAAAGATTTGGAAGGGAGAGGTGCAAGAGGCAGAAAACTGAAGATGATGCTACGGAGAACTGTGACATAAAGCCATTTGGAGACCCGGATGGATGCATAAGGACTTCATGGCTGCAGAGAAAATCCAAAGACACTGAGGTTGATGTTCGCATTATCGACGATGAAGTCACCATCAAACTGATTCAGAGGAAGAAGATCAGCTGCTTGTTGTATGTCTCCAAGGTTCTAGATGAACTTCAATTGGATCTTCACCATGCTGCAGGTGGCCATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATATGTGAAGGTTCTTCAGTATATGCAAGTGCCATAGCCAACAAGGTGATTGAGGTTTTGGACAGGCAGTATGCAGCAGCAGTTCCACATACTAATTGTAGCTATTAA 1503 0.4391 MYEHTASFDPNTMAEAAISRKDSFSEAPPPPLMAAGNSTSSINNGLEENLNLSYHHHHHTPVPEVVSAFANGVTAASTDIVYPQHLGLNGAGNSFNNENLGTHLVQEVIDVLSNEQSNWDPTVQELQDLCYSNTNHEQHQHHQQQFQQIETQSYNTSSSILDTPSYSSSDLLNLLNLPRCSASSLLTSPTQKIPNFPNSMGFLGDIPIGSDSTSTCSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTSSRNGSIFGGAGDEIMEGNGIVYQDGDGSQMDNGVLEFNRGTACVGKGREGKGTKHFATEKQRREQMNDKYQVLRSLIPNPTKADRASVVGDAIDYIRELIRTVNELKLLVEKKRFGRERCKRQKTEDDATENCDIKPFGDPDGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLIQRKKISCLLYVSKVLDELQLDLHHAAGGHVGEYCSFLFNSKICEGSSVYASAIANKVIEVLDRQYAAAVPHTNCSY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2691 500 MobiDBLite consensus disorder prediction 34 50 - -
Sto2g2691 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 299 364 IPR036638 GO:0046983
Sto2g2691 500 MobiDBLite consensus disorder prediction 1 57 - -
Sto2g2691 500 Gene3D - 298 375 IPR036638 GO:0046983
Sto2g2691 500 CDD bHLH_AtMYC1_like 306 370 IPR045896 -
Sto2g2691 500 Pfam Helix-loop-helix DNA-binding domain 304 350 IPR011598 GO:0046983
Sto2g2691 500 PANTHER TRANSCRIPTION FACTOR BHLH91 1 497 - -
Sto2g2691 500 SMART finulus 307 356 IPR011598 GO:0046983
Sto2g2691 500 PANTHER TRANSCRIPTION FACTOR BHLH91 1 497 IPR045895 GO:0006355|GO:0048658
Sto2g2691 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 301 350 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2691 Sto-Chr2 40649823 40653101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2691 1 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 35.728 1.07e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto2g2691 HLH 4.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2691 - - gmx:100782512 664.07