Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2690 ATGAATTTCGCGATGGGAGATGGTGGAGGTGGGGTTGATCGAGACCCTAGTAACTCTCGCAAGGGAAAAAAGTCCTACCATCGTCACACTCCCTATCAGATAGCACAACTTGATGCATCAGTTAAAGTGCACTTTTTTAGGTTTTTTAAGGAGTGCCCACATCCAGATGAGAACCAACGCCGCCATTTAGGTAGAGAGCTTGGGCTAGAGCCAAGACAAATAAAGTTTTGGTTCCAAAATAAGAGAACTCAAGCAAAGACTCAAAATGAGCGAGCAGATAACAATTTTCTTCGGGCTGAAAATGAAAGAGTGCATTGTGAAAACATAGCATTAAGAGAGGCACTGAAGAACATGACTTGCCCATCTTGTGGAGGTCCTCCCTATGGGGAAGAAGAGCTCCAACGTCATCTCCAAAAGTTGCATCTAGAAAATGCTCAACTAAAACAAGAGGCTAGTCAAATATATGAGAGAGTATCAAAACTCCTTGCAAGGTACCTTGGGAAGCCAATAGAGTCACTTTCTCCTTGCTTGGCACCATTGGATCTATCATCACCAACAAGTTCCCCAAACCGACGGCTAGGATGTTCTGGTATTCATGGCATTGATTTTGGGTCACCTTTAGCTGTTTCCGATGTGGATTTGTTTTCCACATTACTGGGAGAAGTTTCAGAAGTGGAAAAGGGACTATTGTTGGAGGCTGCTAGAAATGGGTTGGAAGAATTGATGAAGCTTTTGCGTCTCAATGATCCATTATGGGTCAGGTCTTCTCCTGGTGGACAATGCATTATAAATCGTGACAACTATGAAAAGATATCTTCTAGGGCTAATCACTTCAAAACTCCAAGTGCTCGTGTTGAAGCATCAAAAGACTCACGAGTTGTCTGCAtgaatgcaatgcaattggTCGAGATGTTTCTGGATTCGGACAAATGGTTCAACATTTTCCCAACAATCCTTACCAAAGCTCTAACGATTGCTGTGCTTGATTTTGGATCACCACAAAACCGAGCTGGAGCCTTATTGCTGATGTATGAAGAAATGCACATTCTGTCACCTTTGGTTCCACCTCGAGAATTCTGCTTCATTCGCTATTGTCAAGAAGTGGAACAAGGTGTTTGGGTGATAGCTGATATGTCATTTGATTTCCTAAGAGATAACCTTCCTACTGCTCACATTTGGAAGTTTCCTTCTGGTTGCATGATCCATGAAATGCCCAATGGCTTCTCTAAGgttACATGGGTAGAACATGTGGAGGTTGATGATAAGACCCAAACACACCGACTCTATAGAGATCTTGTTTGTGGCAATTTAGCATATGGAGCACAAAGATGGGTTGTCACACTCGAAAGAATGTGTGAAAGATTTGCATACACCTTGGAAGAAAATATACCCCGTGAGGAAACTCGAGGAGCTAATGGGAGGAGGAGCATCATGAGCCTTGGTCATAGAATGGTGAAGGACTTTTGTGGAATTTTGAACATGTCAAGCAAGATGGATTTCCCTCACTTGTCTGAAGCAACTAATAGTGGGGTCAAGGTTTCTGTCCGAAAAGCCATTGGACCTGGTCAACCTGATGGCATGATTGTCTGTGCTGCCACCTCACTCTGGCTTCCAATTCCTCATCACGCTGTTTTTGACTTCTTCCGAGATGAGAAAAACCGAGTCCAGTGGGATATTCTTTCCCATGGAAACATAGAGCATGAAGTTGCACACATCTCCAATGGAACCCATCCTGGGAACTGCATTTCAATCATTCGGCCTTATATCCCCACTGAGAAGAACATGCTGATACTTCAAGAGTCCTGCACAGACCCCTCAGCATCTTTTGTTGTGTATGCTCCCATAGATGCACCACTGATCAACATGGCCATAAGGGGAGAAGGAGACACATCAAGGATCCCCATCCTCCCGTCCGGCGTCGTGATCTCGAAAGACGGCCGCCCTAGCCCTAACCCTTTCTTGGCCAGCAGCAGCTCCAGCAGCAACAATGGAGGAGGAAGCCTTCTCACTGTAGCCTTTCAGATACTGGTTTGCAGGACATCATCTGTGATGAGGGAGCTGAATGTGGAAACTGTGGCCACAGTGAATACACTCATAAGCTCCACAGTTCAGAAGATCAAGGTGGCTTTGGATTGTGCAAGTGGGGAGTAG 2151 0.4449 MNFAMGDGGGGVDRDPSNSRKGKKSYHRHTPYQIAQLDASVKVHFFRFFKECPHPDENQRRHLGRELGLEPRQIKFWFQNKRTQAKTQNERADNNFLRAENERVHCENIALREALKNMTCPSCGGPPYGEEELQRHLQKLHLENAQLKQEASQIYERVSKLLARYLGKPIESLSPCLAPLDLSSPTSSPNRRLGCSGIHGIDFGSPLAVSDVDLFSTLLGEVSEVEKGLLLEAARNGLEELMKLLRLNDPLWVRSSPGGQCIINRDNYEKISSRANHFKTPSARVEASKDSRVVCMNAMQLVEMFLDSDKWFNIFPTILTKALTIAVLDFGSPQNRAGALLLMYEEMHILSPLVPPREFCFIRYCQEVEQGVWVIADMSFDFLRDNLPTAHIWKFPSGCMIHEMPNGFSKVTWVEHVEVDDKTQTHRLYRDLVCGNLAYGAQRWVVTLERMCERFAYTLEENIPREETRGANGRRSIMSLGHRMVKDFCGILNMSSKMDFPHLSEATNSGVKVSVRKAIGPGQPDGMIVCAATSLWLPIPHHAVFDFFRDEKNRVQWDILSHGNIEHEVAHISNGTHPGNCISIIRPYIPTEKNMLILQESCTDPSASFVVYAPIDAPLINMAIRGEGDTSRIPILPSGVVISKDGRPSPNPFLASSSSSSNNGGGSLLTVAFQILVCRTSSVMRELNVETVATVNTLISSTVQKIKVALDCASGE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2690 716 Gene3D - 238 429 IPR023393 -
Sto2g2690 716 Coils Coil 710 716 - -
Sto2g2690 716 CDD homeodomain 23 89 IPR001356 GO:0003677
Sto2g2690 716 SUPERFAMILY Bet v1-like 474 671 - -
Sto2g2690 716 ProSiteProfiles 'Homeobox' domain profile. 20 88 IPR001356 GO:0003677
Sto2g2690 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 711 IPR042160 -
Sto2g2690 716 MobiDBLite consensus disorder prediction 1 28 - -
Sto2g2690 716 SUPERFAMILY Homeodomain-like 10 89 IPR009057 -
Sto2g2690 716 Pfam START domain 238 454 IPR002913 GO:0008289
Sto2g2690 716 ProSiteProfiles START domain profile. 223 457 IPR002913 GO:0008289
Sto2g2690 716 SUPERFAMILY Bet v1-like 230 456 - -
Sto2g2690 716 CDD START_ArGLABRA2_like 227 453 - -
Sto2g2690 716 Coils Coil 130 164 - -
Sto2g2690 716 Coils Coil 82 102 - -
Sto2g2690 716 Gene3D - 11 103 - -
Sto2g2690 716 SMART START_1 232 454 IPR002913 GO:0008289
Sto2g2690 716 Pfam Homeodomain 24 86 IPR001356 GO:0003677
Sto2g2690 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 18 711 - -
Sto2g2690 716 SMART HOX_1 22 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2690 Sto-Chr2 40636173 40643000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2690 21 710 Homeobox Transcription Factor Family AT1G73360 45.845 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto2g2690 START 1.1e-35 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2690 K09338 - rcu:8266520 857.44