LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g2690	ATGAATTTCGCGATGGGAGATGGTGGAGGTGGGGTTGATCGAGACCCTAGTAACTCTCGCAAGGGAAAAAAGTCCTACCATCGTCACACTCCCTATCAGATAGCACAACTTGATGCATCAGTTAAAGTGCACTTTTTTAGGTTTTTTAAGGAGTGCCCACATCCAGATGAGAACCAACGCCGCCATTTAGGTAGAGAGCTTGGGCTAGAGCCAAGACAAATAAAGTTTTGGTTCCAAAATAAGAGAACTCAAGCAAAGACTCAAAATGAGCGAGCAGATAACAATTTTCTTCGGGCTGAAAATGAAAGAGTGCATTGTGAAAACATAGCATTAAGAGAGGCACTGAAGAACATGACTTGCCCATCTTGTGGAGGTCCTCCCTATGGGGAAGAAGAGCTCCAACGTCATCTCCAAAAGTTGCATCTAGAAAATGCTCAACTAAAACAAGAGGCTAGTCAAATATATGAGAGAGTATCAAAACTCCTTGCAAGGTACCTTGGGAAGCCAATAGAGTCACTTTCTCCTTGCTTGGCACCATTGGATCTATCATCACCAACAAGTTCCCCAAACCGACGGCTAGGATGTTCTGGTATTCATGGCATTGATTTTGGGTCACCTTTAGCTGTTTCCGATGTGGATTTGTTTTCCACATTACTGGGAGAAGTTTCAGAAGTGGAAAAGGGACTATTGTTGGAGGCTGCTAGAAATGGGTTGGAAGAATTGATGAAGCTTTTGCGTCTCAATGATCCATTATGGGTCAGGTCTTCTCCTGGTGGACAATGCATTATAAATCGTGACAACTATGAAAAGATATCTTCTAGGGCTAATCACTTCAAAACTCCAAGTGCTCGTGTTGAAGCATCAAAAGACTCACGAGTTGTCTGCAtgaatgcaatgcaattggTCGAGATGTTTCTGGATTCGGACAAATGGTTCAACATTTTCCCAACAATCCTTACCAAAGCTCTAACGATTGCTGTGCTTGATTTTGGATCACCACAAAACCGAGCTGGAGCCTTATTGCTGATGTATGAAGAAATGCACATTCTGTCACCTTTGGTTCCACCTCGAGAATTCTGCTTCATTCGCTATTGTCAAGAAGTGGAACAAGGTGTTTGGGTGATAGCTGATATGTCATTTGATTTCCTAAGAGATAACCTTCCTACTGCTCACATTTGGAAGTTTCCTTCTGGTTGCATGATCCATGAAATGCCCAATGGCTTCTCTAAGgttACATGGGTAGAACATGTGGAGGTTGATGATAAGACCCAAACACACCGACTCTATAGAGATCTTGTTTGTGGCAATTTAGCATATGGAGCACAAAGATGGGTTGTCACACTCGAAAGAATGTGTGAAAGATTTGCATACACCTTGGAAGAAAATATACCCCGTGAGGAAACTCGAGGAGCTAATGGGAGGAGGAGCATCATGAGCCTTGGTCATAGAATGGTGAAGGACTTTTGTGGAATTTTGAACATGTCAAGCAAGATGGATTTCCCTCACTTGTCTGAAGCAACTAATAGTGGGGTCAAGGTTTCTGTCCGAAAAGCCATTGGACCTGGTCAACCTGATGGCATGATTGTCTGTGCTGCCACCTCACTCTGGCTTCCAATTCCTCATCACGCTGTTTTTGACTTCTTCCGAGATGAGAAAAACCGAGTCCAGTGGGATATTCTTTCCCATGGAAACATAGAGCATGAAGTTGCACACATCTCCAATGGAACCCATCCTGGGAACTGCATTTCAATCATTCGGCCTTATATCCCCACTGAGAAGAACATGCTGATACTTCAAGAGTCCTGCACAGACCCCTCAGCATCTTTTGTTGTGTATGCTCCCATAGATGCACCACTGATCAACATGGCCATAAGGGGAGAAGGAGACACATCAAGGATCCCCATCCTCCCGTCCGGCGTCGTGATCTCGAAAGACGGCCGCCCTAGCCCTAACCCTTTCTTGGCCAGCAGCAGCTCCAGCAGCAACAATGGAGGAGGAAGCCTTCTCACTGTAGCCTTTCAGATACTGGTTTGCAGGACATCATCTGTGATGAGGGAGCTGAATGTGGAAACTGTGGCCACAGTGAATACACTCATAAGCTCCACAGTTCAGAAGATCAAGGTGGCTTTGGATTGTGCAAGTGGGGAGTAG	2151	0.4449	MNFAMGDGGGGVDRDPSNSRKGKKSYHRHTPYQIAQLDASVKVHFFRFFKECPHPDENQRRHLGRELGLEPRQIKFWFQNKRTQAKTQNERADNNFLRAENERVHCENIALREALKNMTCPSCGGPPYGEEELQRHLQKLHLENAQLKQEASQIYERVSKLLARYLGKPIESLSPCLAPLDLSSPTSSPNRRLGCSGIHGIDFGSPLAVSDVDLFSTLLGEVSEVEKGLLLEAARNGLEELMKLLRLNDPLWVRSSPGGQCIINRDNYEKISSRANHFKTPSARVEASKDSRVVCMNAMQLVEMFLDSDKWFNIFPTILTKALTIAVLDFGSPQNRAGALLLMYEEMHILSPLVPPREFCFIRYCQEVEQGVWVIADMSFDFLRDNLPTAHIWKFPSGCMIHEMPNGFSKVTWVEHVEVDDKTQTHRLYRDLVCGNLAYGAQRWVVTLERMCERFAYTLEENIPREETRGANGRRSIMSLGHRMVKDFCGILNMSSKMDFPHLSEATNSGVKVSVRKAIGPGQPDGMIVCAATSLWLPIPHHAVFDFFRDEKNRVQWDILSHGNIEHEVAHISNGTHPGNCISIIRPYIPTEKNMLILQESCTDPSASFVVYAPIDAPLINMAIRGEGDTSRIPILPSGVVISKDGRPSPNPFLASSSSSSNNGGGSLLTVAFQILVCRTSSVMRELNVETVATVNTLISSTVQKIKVALDCASGE	716

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g2690	716	Gene3D	-	238	429	IPR023393	-
	Sto2g2690	716	Coils	Coil	710	716	-	-
	Sto2g2690	716	CDD	homeodomain	23	89	IPR001356	GO:0003677
	Sto2g2690	716	SUPERFAMILY	Bet v1-like	474	671	-	-
	Sto2g2690	716	ProSiteProfiles	'Homeobox' domain profile.	20	88	IPR001356	GO:0003677
	Sto2g2690	716	PANTHER	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1	18	711	IPR042160	-
	Sto2g2690	716	MobiDBLite	consensus disorder prediction	1	28	-	-
	Sto2g2690	716	SUPERFAMILY	Homeodomain-like	10	89	IPR009057	-
	Sto2g2690	716	Pfam	START domain	238	454	IPR002913	GO:0008289
	Sto2g2690	716	ProSiteProfiles	START domain profile.	223	457	IPR002913	GO:0008289

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g2690	Sto-Chr2	40636173	40643000	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g2690	21	710	Homeobox Transcription Factor Family	AT1G73360	45.845	0.0	605

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-HD-ZIP	Sto2g2690		START	1.1e-35	CL0209

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g2690	K09338		-	rcu:8266520	857.44

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