Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2657 ATGGCTCCTGCTGGAGCCACATCTCTCCACTCTTCGCTCTGCAACTTCTCTCCCAACAAACCCACACCCATCCAAATCCCCACCCAATTGGgtcccaaacccaaatccctccTCCAAAAGCATCCTCTCTACACCCCAACTCACACAAAACTCTCCCTTGACTTCAAAGAGAAAATCCTCTGCCTTGAGATCATGGGTGTTGATGCAGGTAAGGCCCTATCCCAAAACCCACTTCTCAGAAATGTCTCTATGGAATCCATCCAttccatcatctccttcctccaCTCCAAAGGCATCCAAGAGAAGGACTTGCCTAGAATCCTAGGCATGTGCCCTAAAATCCTCACCTCCAACATTAAATCTGATCTTAACCCAGTTTTTGATTTCCTCTCACAGGACCTCAAAGTCCCAGATCACAGCTTCAGGAGGGTCATTAACAAATGCCCAAGATTGCTCACTTCAAGTGTTCAAGACCAGCTCAAGCCTGCTTTGGTCTACCTTCAGaggttagggttaagggatttGTCTGCTTTGGCTTATCAGGATTCTGTTTTGCTGGTTTCTAGTGTGGAGAggactctaatccctaaattgaagtatttggaGGGTTTGGGATTCTCAAAGGAAGAGACTAGAGATATGGTTTTGAGATGTCCTGCATTGTTGACCTTTAGTATTGAGAATAATTATGTGCCTAAGTTTGAGTATTTTTGTGGGGAAATGGGGAGGAAATTGGAGGAGCTTAAGGAGTTTCCTCAGTACTTTGCTTTTAGTTTGGAAAATAGGATTAAGCCTAGGCATATGGAGGTTGTGCAAAGTGGTATCAGCCATATGCCTTTGGCTGTGATGCTTAAGAGTACAGATGAAGAGTTTAAGGAGCTAATAAAGCAGAGAACTGGATGA 903 0.3998 MAPAGATSLHSSLCNFSPNKPTPIQIPTQLGPKPKSLLQKHPLYTPTHTKLSLDFKEKILCLEIMGVDAGKALSQNPLLRNVSMESIHSIISFLHSKGIQEKDLPRILGMCPKILTSNIKSDLNPVFDFLSQDLKVPDHSFRRVINKCPRLLTSSVQDQLKPALVYLQRLGLRDLSALAYQDSVLLVSSVERTLIPKLKYLEGLGFSKEETRDMVLRCPALLTFSIENNYVPKFEYFCGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGISHMPLAVMLKSTDEEFKELIKQRTG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2657 300 Pfam mTERF 62 174 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 Pfam mTERF 185 292 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 Gene3D Transcription termination factor 3, mitochondrial 115 299 IPR038538 -
Sto2g2657 300 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 297 - -
Sto2g2657 300 PANTHER CGI-12 PROTEIN-RELATED 13 297 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 105 137 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 70 100 IPR003690 GO:0003690|GO:0006355
Sto2g2657 300 SMART mt_12 212 244 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2657 Sto-Chr2 40359824 40360726 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto2g2657 mTERF 5.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2657 K15032 - gmx:100788221 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2657 2 40359824 40360726 Sto2g2657 2 40359824 40360726 ECH