Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto2g2657 | ATGGCTCCTGCTGGAGCCACATCTCTCCACTCTTCGCTCTGCAACTTCTCTCCCAACAAACCCACACCCATCCAAATCCCCACCCAATTGGgtcccaaacccaaatccctccTCCAAAAGCATCCTCTCTACACCCCAACTCACACAAAACTCTCCCTTGACTTCAAAGAGAAAATCCTCTGCCTTGAGATCATGGGTGTTGATGCAGGTAAGGCCCTATCCCAAAACCCACTTCTCAGAAATGTCTCTATGGAATCCATCCAttccatcatctccttcctccaCTCCAAAGGCATCCAAGAGAAGGACTTGCCTAGAATCCTAGGCATGTGCCCTAAAATCCTCACCTCCAACATTAAATCTGATCTTAACCCAGTTTTTGATTTCCTCTCACAGGACCTCAAAGTCCCAGATCACAGCTTCAGGAGGGTCATTAACAAATGCCCAAGATTGCTCACTTCAAGTGTTCAAGACCAGCTCAAGCCTGCTTTGGTCTACCTTCAGaggttagggttaagggatttGTCTGCTTTGGCTTATCAGGATTCTGTTTTGCTGGTTTCTAGTGTGGAGAggactctaatccctaaattgaagtatttggaGGGTTTGGGATTCTCAAAGGAAGAGACTAGAGATATGGTTTTGAGATGTCCTGCATTGTTGACCTTTAGTATTGAGAATAATTATGTGCCTAAGTTTGAGTATTTTTGTGGGGAAATGGGGAGGAAATTGGAGGAGCTTAAGGAGTTTCCTCAGTACTTTGCTTTTAGTTTGGAAAATAGGATTAAGCCTAGGCATATGGAGGTTGTGCAAAGTGGTATCAGCCATATGCCTTTGGCTGTGATGCTTAAGAGTACAGATGAAGAGTTTAAGGAGCTAATAAAGCAGAGAACTGGATGA | 903 | 0.3998 | MAPAGATSLHSSLCNFSPNKPTPIQIPTQLGPKPKSLLQKHPLYTPTHTKLSLDFKEKILCLEIMGVDAGKALSQNPLLRNVSMESIHSIISFLHSKGIQEKDLPRILGMCPKILTSNIKSDLNPVFDFLSQDLKVPDHSFRRVINKCPRLLTSSVQDQLKPALVYLQRLGLRDLSALAYQDSVLLVSSVERTLIPKLKYLEGLGFSKEETRDMVLRCPALLTFSIENNYVPKFEYFCGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGISHMPLAVMLKSTDEEFKELIKQRTG | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto2g2657 | 300 | Pfam | mTERF | 62 | 174 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | Pfam | mTERF | 185 | 292 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | Gene3D | Transcription termination factor 3, mitochondrial | 115 | 299 | IPR038538 | - | |
Sto2g2657 | 300 | PANTHER | MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN | 13 | 297 | - | - | |
Sto2g2657 | 300 | PANTHER | CGI-12 PROTEIN-RELATED | 13 | 297 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 176 | 207 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 105 | 137 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 142 | 173 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 245 | 276 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 70 | 100 | IPR003690 | GO:0003690|GO:0006355 | |
Sto2g2657 | 300 | SMART | mt_12 | 212 | 244 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto2g2657 | Sto-Chr2 | 40359824 | 40360726 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Sto2g2657 | mTERF | 5.6e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto2g2657 | K15032 | - | gmx:100788221 | 466.077 |