Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2655 ATGAAAACGACGGCAACCCGTACAGGGGATTCTAGAGTCAGTACCCGTGTGGGAAAGTACGAGCTGGGTAGAACTCTCGGTGAGGGTAGTTTTGCGAAGGTAAAGTTTGCTCGGAATGTGGAAACTGGAGAGAATGTGGCCATCAAAATTCTTGACAAGGAAAAGGTTCTCAAGCACAAAATGATTGCCCAGATAAAGCGAGAGATTTCTACAATGAAACTGATTAGACACCCGAATGTCATACGCATGCATGAGGTGATGGCCAGCAAGACAAAGATATACATTGTACTGGAATTTGTGACTGGTGGGGAACTTTTCGATAAAATTGCCAGCAAGGGGAGGTTGAAAGAAGATGAAGCAAGAAAATACTTTCAGCAGCTCATATGTGCTGTAGATTACTGTCACAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAATGGGATGCTTAAAGTTTCAGATTTTGGACTGAGTGCACTGCCTCAACAACTTCGAGAAGATGGGTTGCTTCACACAACATGTGGTACGCCAAACTATGTTGCCCCTGAGGTGATCCACAACAAAGGTTACGATGGTACAAAAGCTGATCTTTGGTCATGTGGCgtcattctttttgttttaatgGCGGGCTATTTGCCCTTTGAAGATAACAACCTTATGGCTTTGTACACAAAGATATTCAAGGCTGAATTCAAGAGTCCTCCATGGTTCTCGTCAAGtgcaaagaaattaatcaagaGAATACTTGATCCCAATCCTGCTACAAGAATTACATTTCCTGAGGTCATTGAGAATGAGTGGTTTAAAAAGGGATATGTACCTCCTAGATTTGAGCAGGCTGATGTCAGTCTTGATGACGTAAATGCTATTTTTAGTCGATCACCGGATTCTCAAAATCTTGTGGTTGAGAAGCGAGAAGAGGGGTCAACGACGCCAGCAGCACCTATGTCTATGAATGCCTTTGAACTTATCTCTACGTCTCAGGGCCTCAACCTTAGTAGTCTTTTCGAGAAACAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCAGATGAGATAATTTCAAAAATTGAGAAAACGGCAGCACCTCTCGGTTTTGATGTTAGGAAGAATAACTGCAAGTTAAAGATTCAAGGGGAAAAGAGTGGACGGAAAGGACATCTATCTGTTTCAACTGAgATCTTTGAGGTGGCCCCTTCACTTTGCATGGTTGAGCTCCGCAAGGCTGGAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAACCTGTCGACTGGGCTGCAAGATGTCGTTTGGAAAGCAGAACCTATCGGTGAAGAAACGAATGGTAATGAAGTTGATATTGTGGAGTGGttttgttttgacttttga 1407 0.4165 MKTTATRTGDSRVSTRVGKYELGRTLGEGSFAKVKFARNVETGENVAIKILDKEKVLKHKMIAQIKREISTMKLIRHPNVIRMHEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGMLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDNNLMALYTKIFKAEFKSPPWFSSSAKKLIKRILDPNPATRITFPEVIENEWFKKGYVPPRFEQADVSLDDVNAIFSRSPDSQNLVVEKREEGSTTPAAPMSMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEKTAAPLGFDVRKNNCKLKIQGEKSGRKGHLSVSTEIFEVAPSLCMVELRKAGGDTLEFHKFYKNLSTGLQDVVWKAEPIGEETNGNEVDIVEWFCFDF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2655 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Sto2g2655 468 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Sto2g2655 468 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2655 468 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2655 468 SUPERFAMILY Protein kinase-like (PK-like) 17 293 IPR011009 -
Sto2g2655 468 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 450 - -
Sto2g2655 468 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g2655 468 CDD STKc_SnRK3 19 274 - -
Sto2g2655 468 Pfam NAF domain 322 382 IPR004041 GO:0007165
Sto2g2655 468 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Sto2g2655 468 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Sto2g2655 468 CDD CIPK_C 326 439 - -
Sto2g2655 468 PANTHER SERINE/THREONINE KINASE 14 450 - -
Sto2g2655 468 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Sto2g2655 468 Gene3D Kinase associated domain 1, KA1 320 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2655 Sto-Chr2 40340834 40346580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2655 15 452 CBL-interacting serine-threonine protein kinases AT1G01140 70.270 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto2g2655 Pkinase 1.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2655 - - gmx:100788746 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2655 2 40340834 40346580 Sto2g2655 2 40340834 40346580 ECH