Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2642 ATGGAAGGAGGAGGAGTTACAAAAGTTGATGCATCTGCTTTCAAAGAGTGTATGTCTCTTGCAAGAAAGAATCCTTATGTTCTTCAACTTGCTTTCTCTGCTGGAATTGGAGGCTTCCTCTTTGGCTATGACACAGGTGTGATATCTGGTGCTCTTTTGTATATTAGGGATGAATTCAAAGCTGTTGCCCAATCAACATGGTTGGAGGGAGCAATAGTGAGTATGGCACTTGTTGGAGCAGCCCTAGGTTCTGCAATTGGAGGATGGAtcaatgaccaatttggaaggaaaaaagcCATCTTTCTTGCAGATATCCTCTTTGCAATTGGCTCTATTATTATGGCTTTTGCTCCCGATCCTTATATTCTCATCGTCGGTCGAGTTTTCGTCGGCTTTGGCGTCGGAATGGCTTCCATGGCTTCTCCTCTTTATATCTCAGAAGCTTCTCCCACTCGAATTAGAGGATCTCTAGTTAGTCTTAACAATTTTCTCGTTACGGGAGGACAATTTCTCTCCTATCTCATCAACTTGGCGTTTACTCATGggagggaagaagaagcaaaagcaaTTATGAGGAAAATCTATGAAGCCCATGAAGTTGAAGGTGAAATACAAGCTCTAGCAGAGTCAATCCAAAAAGACATGAAAGAAGCATCATCTTCAGAAGAAGTAAGCATAGGAAAAATGCTTAGAACAAAAGCTGTGAGAAGAGCCTTATATGCAGGTGTGGGGCTTCAATTTTTCCAGCAATTTACAGGCATCAATACTGTGATGTACTTCAGTCCCACCATTTTCCAATTGGCTGGATTTGCTTCCAATGTGTTAGCACTTCTTCTATCTCTCATCACAGCTGGGCTTAATGCATTAGGGTCTATTGTGAGTATATTCTTCATTGATAAGCTTGGGAGGAAGAAGCTTGTGTTCTTCAGTTTGATTGGTGTTGCTTTCTCccattttcttctctttggTTCATTTTATGAGACTGAGACTCACTCTCCCATGCTTTCACCTGGGGCATGTCTAGCACTAAGTGACTCCACAAAAGGGCAATGCAAGGCAGAAAGAAGGGCATGGTACACCCAAGGGTGTCCTAGCAAGAATGGGTGGCTTGCAATTGTAGGACTTGCCATCTTCATCCTTGCCTTCTCTCCAGGAATGGGCACTGTCCCTTGGGTTTTCAACTCAGAGATATACCCTCTGAGGTACAGAGGGATCTGTGGAGGAATTGCTTCCACCACAGTGTGGGTTTCCAACCTCATTGTGTCCCAATCCTTCTTGCCTCTCACTGTGGCCATTGGGACTTCTTGGACTTTCATGATCTTTGGCTTTGTGGCCATTCTGGGCATCTTCTATATCCTCATCTTCATGCCTGAAACTAAAGGGCTTCCCATTGAGGAATTGGAGATGATGCTAGAACAAAGCGACGGAAGCACCAATCGATTCCATGGGTGGCACCACCACTCTTCTCGAATCATTAGGGTTTCTCGAGCATCTGGTGGGAAGGATCGACACAGCAAGGTGATGACATCGAAGGGCTTGAGAGACCGGAGGGTTCGCCTCTCCGTAACCACGGCTATCCAATTCTACGATCTTCAAGATCGCTTGGGTTACGACCAACCCAGCAAAGCTGTGGAATGGCTAATCAAAGCAGCTTCTGATGCGATTTCTGAGCTTCCTTCTCTGAACAGTACGTTTCCCGAAACCCCAAAGCAACCGAACGACGAGAAGAGGGGTGGTGAAAAATGTTTCGATTCAGCTGATGCAGAGGTAGATGCTTCTTTTACTGAGCTTCTCACAGGTGGGATTAGCACTGGTGTTCCTACTACTACTAGTCCCACTGGGTCAGTTCAACAGAACCATCGTAGTGAGGAGTCTGATCTATTCAACAAGGGAGGTAGGCAGCAATGGAGTTCACCACCTATGGACTACTTTAGCACAGCGTTTCTAGgaccttcatcttcttcaaggACCCATCATCATCAATCTTCTGGGTTTCCAGGGCAAATCCAGTTGGGAAATTCTCTTGCTCAGGCAATGTCGGTTTCGCCTTTTGTAGTCCAAAGTGAAAATCACTCAGATCAACTTCAGCATTTCTCGTTCATCCCTGACCACCTTATGCCGGCTGTAGTTACTTCATCGCAGACGCCTAGCGGCAGTGGCGGCGGGAGCGAGTATAATCTCAACTTCACCATCTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTTTGCCTCATCATCTCCAGAGGTTTTCGCCTATAGACGGATCGTCCAATTTACCTTTCTTCATCGGAGCTGCTGCTGCTGCCGCCCCGGCCATGGAgaatcaccaccaccaccatcagtTCTCGCCTGGATTTGATGGCCGCTTGCAACTCTGCTATGGCGACGGAAGCCGGCATTCAGACCAGAAGGGGAAGGGGAAGAACTGA 2463 0.447 MEGGGVTKVDASAFKECMSLARKNPYVLQLAFSAGIGGFLFGYDTGVISGALLYIRDEFKAVAQSTWLEGAIVSMALVGAALGSAIGGWINDQFGRKKAIFLADILFAIGSIIMAFAPDPYILIVGRVFVGFGVGMASMASPLYISEASPTRIRGSLVSLNNFLVTGGQFLSYLINLAFTHGREEEAKAIMRKIYEAHEVEGEIQALAESIQKDMKEASSSEEVSIGKMLRTKAVRRALYAGVGLQFFQQFTGINTVMYFSPTIFQLAGFASNVLALLLSLITAGLNALGSIVSIFFIDKLGRKKLVFFSLIGVAFSHFLLFGSFYETETHSPMLSPGACLALSDSTKGQCKAERRAWYTQGCPSKNGWLAIVGLAIFILAFSPGMGTVPWVFNSEIYPLRYRGICGGIASTTVWVSNLIVSQSFLPLTVAIGTSWTFMIFGFVAILGIFYILIFMPETKGLPIEELEMMLEQSDGSTNRFHGWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNSTFPETPKQPNDEKRGGEKCFDSADAEVDASFTELLTGGISTGVPTTTSPTGSVQQNHRSEESDLFNKGGRQQWSSPPMDYFSTAFLGPSSSSRTHHHQSSGFPGQIQLGNSLAQAMSVSPFVVQSENHSDQLQHFSFIPDHLMPAVVTSSQTPSGSGGGSEYNLNFTISSSGGLAGFNSRGTLQSNSPSLLPHHLQRFSPIDGSSNLPFFIGAAAAAAPAMENHHHHHQFSPGFDGRLQLCYGDGSRHSDQKGKGKN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2642 820 ProSiteProfiles TCP domain profile. 500 558 IPR017887 -
Sto2g2642 820 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 460 IPR020846 GO:0022857
Sto2g2642 820 PANTHER GENERAL SUBSTRATE TRANSPORTER 4 181 - -
Sto2g2642 820 PANTHER GENERAL SUBSTRATE TRANSPORTER 336 478 - -
Sto2g2642 820 PANTHER GENERAL SUBSTRATE TRANSPORTER 179 336 - -
Sto2g2642 820 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 179 336 - -
Sto2g2642 820 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 336 478 - -
Sto2g2642 820 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 181 - -
Sto2g2642 820 CDD MFS_HMIT_like 33 458 - -
Sto2g2642 820 ProSitePatterns Sugar transport proteins signature 1. 294 310 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto2g2642 820 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto2g2642 820 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto2g2642 820 PRINTS Sugar transporter signature 249 259 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto2g2642 820 PRINTS Sugar transporter signature 372 393 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto2g2642 820 PRINTS Sugar transporter signature 395 407 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto2g2642 820 Pfam TCP family transcription factor 499 608 IPR017887 -
Sto2g2642 820 Pfam Sugar (and other) transporter 180 470 IPR005828 GO:0016021|GO:0022857|GO:0055085
Sto2g2642 820 SUPERFAMILY MFS general substrate transporter 22 468 IPR036259 -
Sto2g2642 820 MobiDBLite consensus disorder prediction 559 579 - -
Sto2g2642 820 MobiDBLite consensus disorder prediction 601 622 - -
Sto2g2642 820 Gene3D MFS general substrate transporter like domains 181 475 IPR036259 -
Sto2g2642 820 MobiDBLite consensus disorder prediction 601 634 - -
Sto2g2642 820 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto2g2642 820 Gene3D MFS general substrate transporter like domains 20 180 IPR036259 -
Sto2g2642 820 Pfam Major Facilitator Superfamily 36 179 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2642 Sto-Chr2 40157803 40188969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2642 1 491 Organic Solute Cotransporters AT1G30220 55.035 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto2g2642 Sugar_tr 9.5e-54 CL0015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2642 K08150 - gmx:100785111 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2642 2 40157803 40188969 Sto2g2642 2 40157803 40188969 ECH