Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2627 ATGAGTTTTCCTTCAGGTTCTGGGAAAGATGACCATATTATGAAAGAAAATAGTCCTTTTTATTGTTGGTATTGTGACACAGACTTGAAAACCTCTCGAGATTTCTCAAGGCATCTCAAGACTTGTCATATTAAGCTTTCgtttgaagaaaatgaaaggaaacCCATTAGTACTTCTTACAATTCAAGCGGAAGTGAATCAAAAGAcgataaatccaatcctaattATAAGATCCCTACAAAGGATGAAATAATTTCGGCCCTTCAAGCTCTAATTGATGAAACCAAGACTCTAAACCCATATAGGCTTGGTGATGAAAAAGAGATGCCTGAGGTTGAGGAACATAATGAAGTTTCAGAGGATGCAACGATTAAGCAACGTAAGGAAGTTCCAAATTATGTTTCTGCAAAAGGAAAAGAGATTGCAACTATTGCAGAtgaagaagttgaagaagatTCTGATGACTCTGTTTCTATGTAG 480 0.3208 MSFPSGSGKDDHIMKENSPFYCWYCDTDLKTSRDFSRHLKTCHIKLSFEENERKPISTSYNSSGSESKDDKSNPNYKIPTKDEIISALQALIDETKTLNPYRLGDEKEMPEVEEHNEVSEDATIKQRKEVPNYVSAKGKEIATIADEEVEEDSDDSVSM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2627 159 ProSitePatterns Zinc finger C2H2 type domain signature. 22 43 IPR013087 -
Sto2g2627 159 MobiDBLite consensus disorder prediction 53 69 - -
Sto2g2627 159 MobiDBLite consensus disorder prediction 99 125 - -
Sto2g2627 159 MobiDBLite consensus disorder prediction 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2627 Sto-Chr2 40012632 40013596 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto2g2627 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2627 - K11721 sinu:IMZ28_05155 39.6614