LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g2605	ATGGCAAGTGGAACTGATAATAATAAGATGATACTGTACTCTTGTTGGAGGAGCTCTTGCTCGCATCGAGTTCGAATCGCTCTTAACTTGAAAGAATTCCTGAAGCTCAATCCTGTTGGTTATGTTCCTGTTCTTGTGGATGGGGACTTTGTAGTTTTTGACTCTTTTGCCATCATTATGTATTTGGAGGATAAGTTTCCACAGCATACCTTGCTGCCTTGTGATATTCAGAAAAGAACAATCAATtttcaggtTGCCAATATTGTTGCCTCAAGTATACAGCCTTCACAAAATCTTGCTATAATGaaattaaaaaagaaatggtTCAGAAAACAAGGTTTTTACCAAGTGGATTCAGGAGAGAATATTTATGGTGACATACCACCAGAAATAGATAgattgtttccaaaatttgatcCGCAAAAATCAATTGAGGAAAAAGTTAGCTCAGATCAAAAACTTTCTAGGATCAATAGTGTTATAAGAAAAGGTTTCACAGCAATTGAAAAACTATTGAAAAACTTTACAGGAAGATATGCAACAGGAGATGAAGTTCACCTGGCAACTGGAAgtgataataatgataataagcTGATACTGTATTCGTTTTGGAGGAGCTCGTGCGCGTTCCGAGTCCAAATCGCTCTCAATTTCAAAGGGCTAAAATATGAGTATAAAGCAGTCAATTTATGGAAGGAACAACAATCTCACCCTGAGTTCCTGAAGCTCAATCCTGTTGGTTTTGTTCCTGTTCTTGCGGATGGGGACTTTGTAGTTTCTGACTCTTTTGCCATCATTATGTATTTGGAGGATAAGTTTCCACAACACCCCTTGCTGCCTCGCGATATTCAGAAAAGAACAATCAATTTTCAGGTTGCCAGTATTGTATCCTCAAGTATACAGCCTATGCAAAACCTCACTTTACTGAAGTGCATTGATGAAACAATTAACCCTGCTAAAAAGCTTCCTTGGCTCAGTAGGGTTTTTATACGAAAAGGCTTCACAGCACTTGAAAAACTATTGAAAGACCATGCAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGAATGGTCCAGGTGGTGATCTTCAACTCACACTTGGTTATTCGATGCAGACAGAGTTCCCTATTCTAGCAAGACTAAATGAGACATATAAGGAGATTCCAGCATTCCGAGAGGCTTTGCCGGAGAACCAGCCAGATGCTCCCTCTCAGGGACACACTAGTTGA	1230	0.378	MASGTDNNKMILYSCWRSSCSHRVRIALNLKEFLKLNPVGYVPVLVDGDFVVFDSFAIIMYLEDKFPQHTLLPCDIQKRTINFQVANIVASSIQPSQNLAIMKLKKKWFRKQGFYQVDSGENIYGDIPPEIDRLFPKFDPQKSIEEKVSSDQKLSRINSVIRKGFTAIEKLLKNFTGRYATGDEVHLATGSDNNDNKLILYSFWRSSCAFRVQIALNFKGLKYEYKAVNLWKEQQSHPEFLKLNPVGFVPVLADGDFVVSDSFAIIMYLEDKFPQHPLLPRDIQKRTINFQVASIVSSSIQPMQNLTLLKCIDETINPAKKLPWLSRVFIRKGFTALEKLLKDHAGRYATGDEVFLNGPGGDLQLTLGYSMQTEFPILARLNETYKEIPAFREALPENQPDAPSQGHTS	409

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Sto2g2605	409	Pfam	Glutathione S-transferase, N-terminal domain	32	68	IPR004045	-
Sto2g2605	409	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	196	277	IPR004045	-
Sto2g2605	409	Gene3D	-	73	192	-	-
Sto2g2605	409	Gene3D	-	281	405	-	-
Sto2g2605	409	SFLD	Main (cytGST)	199	353	-	-
Sto2g2605	409	TIGRFAM	maiA: maleylacetoacetate isomerase	199	402	IPR005955	GO:0003824\|GO:0005737\|GO:0009072
Sto2g2605	409	SFLD	Glutathione Transferase (cytosolic)	199	353	IPR040079	-
Sto2g2605	409	SUPERFAMILY	Thioredoxin-like	192	281	IPR036249	-
Sto2g2605	409	Gene3D	Glutaredoxin	195	280	-	-
Sto2g2605	409	SUPERFAMILY	GST C-terminal domain-like	277	403	IPR036282	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g2605	Sto-Chr2	39762473	39774866	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g2605	197	404	Glutathione S-transferase Gene Family	AT2G02380	54.717	2.12e-74	229

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g2605	K01800		-	pvy:116109400	277.33

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g2605	2	39762473	39774866	Sto2g2605	2	39762473	39774866	ECH

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