Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2580 ATGTCTGAAGATGCTAGCCCAATGTTGGTGGTTTATGATGATCCTTCAGACCAACGATCGCTGTCTTTGGATGATACAAGCAGCACAGAGGAATCGCCAGATGAAACCAGGCTCTCACTGGAAACTACAAATGATGCAATACCATATATTGGGCAAAGATTTAGCACTCATGATGCTGCTTATGAGTTTTATAGTGAATTTGCCAAGCGGTGTGGGTTCTCAATTCGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTTACTAGGCGCTACTTTGTTTGTCATCGTGCTGGTAACACTCCTGTTAAAACATCGACTGACAGTAAACCACAAAGAAATCGAAAATCTTCCCGATGTGGATGTCAGGCTTACATGCGTATAAGCAAGACAACAGAATTAGGTGCTCCAGAATGGCGTGTTACTGGTTTTGCTAACCACCATAATCATGAACTTTTAGAACCAAACCAAGTTCGATTCCTCCCTGCATATAGAACTATTTCAGATTCAGACAAAACCCGAATCCTGATGTATGCTAAAACAGGGATTTCTGTCCATCAAATGATGCGGCTTATGGAGCTTGAGAAGTGTGTGGAACCTGGATACCTGCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAGTCATTTAGGAAATTAGATCCGGAAGAGGAAAGCATAGATTTGTTGAGAATGTGCAAAAATATTAAGGAGAAAGACCCTAATTTCAGATTTGAGTTCACACTTGATACAAACAACTGTTTGGAGAATATAGCGTGGTCATATGCCTCATCTATACAGTCATATGATATCTTTGGTGATGCGGTGGTATTTGATACGACACATCGTCTGACTGCTTTTGATATGCCACTTGGTATATGGGTTGGAATGAATAATTATGGAATGCCCTGCTTTTTTGGATGTGTGCTTCTACGAGAAGAAAACTTAAGGTCATATTCATGGGCGTTGAAGGCATTCTTAGGGTTTATGAACGGGAAGGCTCCACAAACAATATTAACTGACCAAAATATGTGCCTCAAAGAAGCATTAGCCATGGAAATGCCAGCCACCAAACACGCACTCTGCATATGGATGATTGTAGCAAAATTTCCTTCTTGGTTTAGTGCTGTTCTGGGAGAACGTTACAATGAGTGGAAAGCTGAATTTTATAGACTGTACAATCTTGAGTCAGTTGAGGACTTCGAACTGGGTTGGAGGGATATGGTAGCTGTTGCTGTggatttcaaagatcaaactgGAGAACAACAAACAATGCAACAGAATCTTCAAAACATTTGCCTCAAAACTGGAGCCCCCATGGAGTCACATGCTGCCACAATTCTCACGCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCGCATTATGCATCTTTTCCATTTGAAGACGGTTTTCTTGTGAGACACCACACAAAAGCTGATGGAGGTCGAAAAGTGTATTGGGCGCCCCGGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTCTGTCGGCATGCTCTTAGAGTACTTTCAACAGGAAATTGCTTTCAGATCCCAGATAGATATCTTCCCTCTCGTTGGCGTCGAATCAGCATGACTTCTGCTAAGCTTCTTCAGAGTACACCTAATGATCATGGTGAAAGAGTacagttattacaaaatatggTTTCTTCTCTTATAACAGAATCTGCTAAGTCAAAGGAAAGATTAGATATTGCAACAGAACAAGTTTCTATCCTTCTGTCTCGAATAAGGGAGCAACCAGTTTCATTACAAGGTGTCAGAGAAATGTCTAGCATTGGTAGGAATCTTTGA 1848 0.4069 MSEDASPMLVVYDDPSDQRSLSLDDTSSTEESPDETRLSLETTNDAIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTDSKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKTRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESIDLLRMCKNIKEKDPNFRFEFTLDTNNCLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNGKAPQTILTDQNMCLKEALAMEMPATKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPFEDGFLVRHHTKADGGRKVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSAKLLQSTPNDHGERVQLLQNMVSSLITESAKSKERLDIATEQVSILLSRIREQPVSLQGVREMSSIGRNL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2580 615 Pfam SWIM zinc finger 495 523 IPR007527 GO:0008270
Sto2g2580 615 ProSiteProfiles Zinc finger SWIM-type profile. 489 525 IPR007527 GO:0008270
Sto2g2580 615 MobiDBLite consensus disorder prediction 1 42 - -
Sto2g2580 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 412 IPR031052 GO:0006355
Sto2g2580 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 414 609 IPR031052 GO:0006355
Sto2g2580 615 SMART 26again6 500 527 IPR006564 GO:0008270
Sto2g2580 615 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 18 412 - -
Sto2g2580 615 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 414 609 - -
Sto2g2580 615 Pfam MULE transposase domain 278 370 IPR018289 -
Sto2g2580 615 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2580 Sto-Chr2 39418415 39421057 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto2g2580 MULE 4.2e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2580 - - peq:110029905 809.675